RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 MMP9P14780 707 aa9.14□□□□□ -0.95
MUC4-201ENST00000308466 HIST1H3AP68431 136 aa9.14□□□□□ -0.95
MUC4-201ENST00000308466 GALNT14Q96FL9 552 aa9.14□□□□□ -0.95
MUC4-201ENST00000308466 DIRC2Q96SL1 478 aa9.14□□□□□ -0.95
MUC4-201ENST00000308466 PSG11Q9UQ72 335 aa9.14□□□□□ -0.95
MUC4-201ENST00000308466 A0A1W2PPV4 95 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 PGLYRP1O75594 196 aaPredicted RBP9.13□□□□□ -0.95
MUC4-201ENST00000308466 IRF2P14316 349 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 GFRA1P56159 465 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 ADIRFQ15847 76 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 Q8IYB0 196 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 ST6GALNAC3Q8NDV1 305 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 HS3ST6Q96QI5 342 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 SPRY3O43610 288 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 OR2H2O95918 312 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 CRYAAP02489 173 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 PDLIM3Q53GG5 364 aaPredicted RBP9.13□□□□□ -0.95
MUC4-201ENST00000308466 SELENOHQ8IZQ5 122 aaKnown RBP9.13□□□□□ -0.95
MUC4-201ENST00000308466 TBX15Q96SF7 602 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 LIME1Q9H400 295 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 BARX1Q9HBU1 254 aaPredicted RBP9.13□□□□□ -0.95
MUC4-201ENST00000308466 RBFOX3A6NFN3 312 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 A8MWP6 167 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 PROB1E7EW31 1015 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 H0YL77 283 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 CELA3BP08861 270 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 PRAMEF5Q5TYX0 476 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 ZNF429Q86V71 674 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 OR1L6Q8NGR2 347 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 RPUSD4Q96CM3 377 aaKnown RBP9.13□□□□□ -0.95
MUC4-201ENST00000308466 RAB40CQ96S21 281 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 FKBP11Q9NYL4 201 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 BDP1A6H8Y1 2624 aa9.13□□□□□ -0.95
MUC4-201ENST00000308466 TRBV6-7A0A0A0MS04 114 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 DKK1O94907 266 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 HAND1O96004 215 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 CHRNB4P30926 498 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 TNFSF10P50591 281 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 RAB7AP51149 207 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 DLK1P80370 383 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 SCCPDHQ8NBX0 429 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 OR10P1Q8NGE3 313 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 OR4A16Q8NH70 328 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 TMEM45BQ96B21 275 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 BTF3L4Q96K17 158 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 POM121L2Q96KW2 1035 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 LINC00470Q9BZP3 86 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 SPTBN1Q01082 2364 aaKnown RBP9.12□□□□□ -0.95
MUC4-201ENST00000308466 PPP5D1E7EU14 171 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 FGF16O43320 207 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 GPR12P47775 334 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 UCP2P55851 309 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 RPS23P62266 143 aaKnown RBP9.12□□□□□ -0.95
MUC4-201ENST00000308466 SRSF4Q08170 494 aaKnown RBP9.12□□□□□ -0.95
MUC4-201ENST00000308466 HIST3H2BBQ8N257 126 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 RNF138Q8WVD3 245 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 MS4A10Q96PG2 267 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 RSG1Q9BU20 258 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 TUBA4BQ9H853 241 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 RFNGQ9Y644 331 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 H3BQ15 152 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 RAB29O14966 203 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 LILRA1O75019 489 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 RNASE8Q8TDE3 154 aaKnown RBP9.12□□□□□ -0.95
MUC4-201ENST00000308466 LRRC29Q8WV35 223 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 OR5P3Q8WZ94 311 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 GPR146Q96CH1 333 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 RARRES2Q99969 163 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 PPIAL4AQ9Y536 164 aa9.12□□□□□ -0.95
MUC4-201ENST00000308466 DOCK11Q5JSL3 2073 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 IGSF23A1L1A6 192 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 M0QZK8 103 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 GGCTO75223 188 aaKnown RBP9.11□□□□□ -0.95
MUC4-201ENST00000308466 SMIM21Q3B7S5 101 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 COL5A1-AS1Q5SY13 56 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 FOXL2NBQ6ZUU3 175 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 MYPOPQ86VE0 399 aaPredicted RBP9.11□□□□□ -0.95
MUC4-201ENST00000308466 HIST1H2BLQ99880 126 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 FAM103A1Q9BTL3 118 aaKnown RBP9.11□□□□□ -0.95
MUC4-201ENST00000308466 G6PCP35575 357 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 MZT1Q08AG7 82 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 IL24Q13007 206 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 FAM214BQ7L5A3 538 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 MSI2Q96DH6 328 aaKnown RBP9.11□□□□□ -0.95
MUC4-201ENST00000308466 GMPPAQ96IJ6 420 aaPredicted RBP9.11□□□□□ -0.95
MUC4-201ENST00000308466 ABHD14AQ9BUJ0 271 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 RNF122Q9H9V4 155 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 SELENOKQ9Y6D0 94 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 ADAMTS9Q9P2N4 1935 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 WNT9BO14905 357 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 ATXN7O15265 892 aaPredicted RBP9.11□□□□□ -0.95
MUC4-201ENST00000308466 OR4A8P0C604 315 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 C16orf54Q6UWD8 224 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 MOB1BQ7L9L4 216 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 FDCSPQ8NFU4 85 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 OR52L2PQ8NGH6 319 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 VAMP8Q9BV40 100 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 TUBD1Q9UJT1 453 aa9.11□□□□□ -0.95
MUC4-201ENST00000308466 FAM90A10PA6NDY2 464 aa9.1□□□□□ -0.95
MUC4-201ENST00000308466 FAM90A18PA6NE21 464 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms