RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 GNG12Q9UBI6 72 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 PSG11Q9UQ72 335 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 CHST1O43916 411 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 PITX3O75364 302 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 LINC00205P59089 165 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 BTN1A1Q13410 526 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 CLINT1Q14677 625 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 HSD17B11Q8NBQ5 300 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 FAM122AQ96E09 287 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 LRRC46Q96FV0 321 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 SH3BGRL3Q9H299 93 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 MS4A5Q9H3V2 200 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 PLEKHF2Q9H8W4 249 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 IGKV1-5P01602 117 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 TFF3Q07654 80 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 TRAT1Q6PIZ9 186 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 ATRAIDQ6UW56 229 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 TMEM252Q8N6L7 170 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 C14orf79Q96F83 325 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 A0A1B0GU03 582 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 TMEM178BH3BS89 294 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 WRBO00258 174 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 RPL30P62888 115 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 HTD2P86397 168 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 PJVKQ0ZLH3 352 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 IL34Q6ZMJ4 242 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 Q6ZRG5 221 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 ODF3L1Q8IXM7 274 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 TOLLIPQ9H0E2 274 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 TMEM231Q9H6L2 316 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 TMEM106BQ9NUM4 274 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 CACNG5Q9UF02 275 aa18.61■□□□□ 0.57
PDLIM2-202ENST00000308354 NUDT19A8MXV4 375 aa18.6■□□□□ 0.57
PDLIM2-202ENST00000308354 SPP1P10451 314 aa18.6■□□□□ 0.57
PDLIM2-202ENST00000308354 DEFA5Q01523 94 aa18.6■□□□□ 0.57
PDLIM2-202ENST00000308354 LEAP2Q969E1 77 aa18.6■□□□□ 0.57
PDLIM2-202ENST00000308354 FAM212BQ9NTI7 297 aaPredicted RBP18.6■□□□□ 0.57
PDLIM2-202ENST00000308354 CALYQ9NYX4 217 aa18.6■□□□□ 0.57
PDLIM2-202ENST00000308354 PIGBOS1A0A0B4J2F0 54 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 TMEM218A2RU14 115 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 B9A039 149 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 CST7O76096 145 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 SEC11BP0C7V7 166 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 BLOC1S1P78537 153 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 CR1LQ2VPA4 569 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 MUC15Q8N387 334 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 AGMATQ9BSE5 352 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 PARP11Q9NR21 331 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 OR6C3Q9NZP0 311 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 PPIAL4EA0A075B759 164 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 PPIAL4DF5H284 164 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 RAMP3O60896 148 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 PPIAL4FP0DN26 164 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 SLC25A6P12236 298 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 GNLYP22749 145 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 LOXL3P58215 753 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 EFNB3Q15768 340 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 C17orf58Q2M2W7 97 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 TCF23Q7RTU1 214 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 LSM10Q969L4 123 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 SLC25A31Q9H0C2 315 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 PPIAL4AQ9Y536 164 aa18.59■□□□□ 0.57
PDLIM2-202ENST00000308354 KIAA1324LA8MWY0 1029 aaPredicted RBP18.58■□□□□ 0.57
PDLIM2-202ENST00000308354 ZG16O60844 167 aa18.58■□□□□ 0.57
PDLIM2-202ENST00000308354 NDUFB7P17568 137 aa18.58■□□□□ 0.57
PDLIM2-202ENST00000308354 ADCYAP1P18509 176 aa18.58■□□□□ 0.57
PDLIM2-202ENST00000308354 PAX9P55771 341 aa18.58■□□□□ 0.57
PDLIM2-202ENST00000308354 SWI5Q1ZZU3 235 aa18.58■□□□□ 0.57
PDLIM2-202ENST00000308354 MORN2Q502X0 79 aa18.58■□□□□ 0.57
PDLIM2-202ENST00000308354 BTNL8Q6UX41 500 aa18.58■□□□□ 0.57
PDLIM2-202ENST00000308354 FAM96BQ9Y3D0 163 aa18.58■□□□□ 0.57
PDLIM2-202ENST00000308354 TRAV38-1A0A0B4J264 116 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 TMEM8BA6NDV4 472 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 AGPAT2O15120 278 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 CLDN14O95500 239 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 MMP9P14780 707 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 ZNF134P52741 427 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 Q3ZCU0 254 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 ZNF672Q499Z4 452 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 C1orf87Q8N0U7 546 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 TMEM217Q8N7C4 229 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 OR5C1Q8NGR4 320 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 CFAP46Q8IYW2 2715 aa18.58■□□□□ 0.56
PDLIM2-202ENST00000308354 DCHS2Q6V1P9 2916 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 RNF212BA8MTL3 300 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 H3BP45 60 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 CGB3P0DN86 165 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 CGB7P0DN87 165 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 LOXP28300 417 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 FHITP49789 147 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 ZNF295-AS1Q8N0V1 137 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 TREM1Q9NP99 234 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 HRNRQ86YZ3 2850 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 A0A1W2PPE3 182 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 LYNX1G3V0Z9 82 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 FCN3O75636 299 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 C1QL1O75973 258 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 DANCRP0C864 163 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 LYNX1P0DP58 116 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 F2RL1P55085 397 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms