RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 GJE1A6NN92 205 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 RPL36A-HNRNPH2H7BZ11 118 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 ST8SIA5O15466 376 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 CDS2O95674 445 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 Q6ZPA2 131 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 ATOH7Q8N100 152 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 OR1L1Q8NH94 360 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 APH1AQ96BI3 265 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 PINLYPA6NC86 204 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 MGST1P10620 155 aaKnown RBP12.39□□□□□ -0.43
PTPN9-201ENST00000306726 ST6GALNAC3Q8NDV1 305 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 OR4D5Q8NGN0 318 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 TRAPPC1Q9Y5R8 145 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 SGK494Q96LW2 274 aa12.39□□□□□ -0.43
PTPN9-201ENST00000306726 IGKV1-6A0A0C4DH72 117 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 OR4A8P0C604 315 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 MPZP25189 248 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 PCOLCEQ15113 449 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 ATP1A1-AS1Q5TC04 95 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 H2BFWTQ7Z2G1 175 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 GALNT14Q96FL9 552 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 ZDHHC11Q9H8X9 412 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 NUP210LQ5VU65 1888 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 TOX4O94842 621 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 PMCHP20382 165 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 OR10P1Q8NGE3 313 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 BTF3L4Q96K17 158 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 OR2J1Q9GZK6 312 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 PARLQ9H300 379 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 PPIAL4AQ9Y536 164 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 TNFSF15O95150 251 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 PMELP40967 661 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 MRPL14Q6P1L8 145 aaKnown RBP12.38□□□□□ -0.43
PTPN9-201ENST00000306726 CRIP3Q6Q6R5 217 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 FAM122AQ96E09 287 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 MS4A10Q96PG2 267 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 CDH20Q9HBT6 801 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 DEPPQ9NTK1 212 aa12.38□□□□□ -0.43
PTPN9-201ENST00000306726 YLPM1P49750 1951 aaKnown RBP12.38□□□□□ -0.43
PTPN9-201ENST00000306726 PPIHO43447 177 aaKnown RBP12.37□□□□□ -0.43
PTPN9-201ENST00000306726 HIST1H3AP68431 136 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 FGFRL1Q8N441 504 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 VN1R17PQ8TDU5 208 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 RNF122Q9H9V4 155 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 DLL3Q9NYJ7 618 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 OR2W1Q9Y3N9 320 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 MGAQ8IWI9 3026 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 C11orf94C9JXX5 98 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 SLC17A3O00476 420 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 CELA3BP08861 270 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 TCTAP57738 103 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 UBE2NP61088 152 aaKnown RBP12.37□□□□□ -0.43
PTPN9-201ENST00000306726 ZNF90Q03938 601 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 TMEM256Q8N2U0 113 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 NHLRC2Q8NBF2 726 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 TAAR3PQ9P1P4 343 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 ATP23Q9Y6H3 246 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 hCG_38984A0A1B0GV85 526 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 FCGR3BO75015 233 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 APELAP0DMC3 54 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 HIST1H1BP16401 226 aaKnown RBP12.37□□□□□ -0.43
PTPN9-201ENST00000306726 TFPI2P48307 235 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 GNB2P62879 340 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 IL24Q13007 206 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 DPPA3Q6W0C5 159 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 OR2T10Q8NGZ9 312 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 OIT3Q8WWZ8 545 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 SEBOXQ9HB31 216 aaPredicted RBP12.37□□□□□ -0.43
PTPN9-201ENST00000306726 GYPAP02724 150 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 PRAMEF6Q5VXH4 476 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 TMEM211Q6ICI0 200 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 RAB24Q969Q5 203 aa12.37□□□□□ -0.43
PTPN9-201ENST00000306726 SPG11Q96JI7 2443 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 LOC102724200A0A096LPH7 203 aaPredicted RBP12.36□□□□□ -0.43
PTPN9-201ENST00000306726 LOC102723971A0A1B0GUV8 181 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 C1QTNF9P0C862 333 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 LYL1P12980 280 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 ATP5G3P48201 142 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 PRR27Q6MZM9 219 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 TIPARPQ7Z3E1 657 aaKnown RBP12.36□□□□□ -0.43
PTPN9-201ENST00000306726 OR2Y1Q8NGV0 311 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 SPRY4Q9C004 299 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 EREGO14944 169 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 UMODP07911 640 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 MEF2BQ02080 365 aaPredicted RBP12.36□□□□□ -0.43
PTPN9-201ENST00000306726 ACSM6Q6P461 480 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 LHFPL4Q7Z7J7 247 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 SGMS2Q8NHU3 365 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 ANGPTL4Q9BY76 406 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 VAX2Q9UIW0 290 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 NAPSAO96009 420 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 AMBPP02760 352 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 FOLR2P14207 255 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 PKIAP61925 76 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 PRAMEF5Q5TYX0 476 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 TBX15Q96SF7 602 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 FBLN5Q9UBX5 448 aa12.36□□□□□ -0.43
PTPN9-201ENST00000306726 ZNF503-AS2A6NEH8 195 aa12.35□□□□□ -0.43
PTPN9-201ENST00000306726 CBLN1P23435 193 aa12.35□□□□□ -0.43
PTPN9-201ENST00000306726 PAX5Q02548 391 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms