RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 FAM90A9PA6NNJ1 464 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 M0QYG6 137 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 M0R1X1 148 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 PPYP01298 95 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 FXYD4P59646 89 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 TSPAN5P62079 268 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 SSBP1Q04837 148 aaKnown RBP17.91■□□□□ 0.46
HOXD4-201ENST00000306324 LSAMPQ13449 338 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 HABP2Q14520 560 aaPredicted RBP17.91■□□□□ 0.46
HOXD4-201ENST00000306324 FBLN7Q53RD9 439 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 ACTBL2Q562R1 376 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 LIAT1Q6ZQX7 453 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 DRAXINQ8NBI3 349 aaPredicted RBP17.91■□□□□ 0.46
HOXD4-201ENST00000306324 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.91■□□□□ 0.46
HOXD4-201ENST00000306324 GIMAP1Q8WWP7 306 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 TAF15Q92804 592 aaKnown RBP eCLIP17.91■□□□□ 0.46
HOXD4-201ENST00000306324 SDHAF2Q9NX18 166 aa17.91■□□□□ 0.46
HOXD4-201ENST00000306324 GSTZ1O43708 216 aaPredicted RBP17.9■□□□□ 0.46
HOXD4-201ENST00000306324 CHST1O43916 411 aa17.9■□□□□ 0.46
HOXD4-201ENST00000306324 PROP1O75360 226 aa17.9■□□□□ 0.46
HOXD4-201ENST00000306324 CD3DP04234 171 aa17.9■□□□□ 0.46
HOXD4-201ENST00000306324 ETV6P41212 452 aa17.9■□□□□ 0.46
HOXD4-201ENST00000306324 HNF4GQ14541 408 aa17.9■□□□□ 0.46
HOXD4-201ENST00000306324 ZNF79Q15937 498 aa17.9■□□□□ 0.46
HOXD4-201ENST00000306324 DHRS7BQ6IAN0 325 aaPredicted RBP17.9■□□□□ 0.46
HOXD4-201ENST00000306324 THNSL2Q86YJ6 484 aa17.9■□□□□ 0.46
HOXD4-201ENST00000306324 SECTM1Q8WVN6 248 aa17.9■□□□□ 0.46
HOXD4-201ENST00000306324 RBMXL1Q96E39 390 aaKnown RBP17.9■□□□□ 0.46
HOXD4-201ENST00000306324 ZNF2Q9BSG1 426 aaPredicted RBP17.9■□□□□ 0.46
HOXD4-201ENST00000306324 RAB18Q9NP72 206 aa17.9■□□□□ 0.46
HOXD4-201ENST00000306324 CT45A6P0DMU7 189 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 CT45A5P0DMU8 189 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 CT45A7P0DMV0 189 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 TMEM11P17152 192 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 PTBP1P26599 531 aaKnown RBP eCLIP17.89■□□□□ 0.45
HOXD4-201ENST00000306324 CD1BP29016 333 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 TAS2R19P59542 299 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 HERV-K104P61576 105 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 RNASE10Q5GAN6 216 aaKnown RBP17.89■□□□□ 0.45
HOXD4-201ENST00000306324 DHRS11Q6UWP2 260 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 GLDNQ6ZMI3 551 aaPredicted RBP17.89■□□□□ 0.45
HOXD4-201ENST00000306324 Q8N402 240 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 ZNF645Q8N7E2 425 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 TMEM229BQ8NBD8 167 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 OR6F1Q8NGZ6 308 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 TMEM158Q8WZ71 300 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 GAB2Q9UQC2 676 aa17.89■□□□□ 0.45
HOXD4-201ENST00000306324 RBMX2Q9Y388 322 aaKnown RBP17.89■□□□□ 0.45
HOXD4-201ENST00000306324 IFNA6P05013 189 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 CSF1P09603 554 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 TMEM17Q86X19 198 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 C5orf30Q96GV9 206 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 SLC25A33Q9BSK2 321 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 THAP7Q9BT49 309 aaPredicted RBP17.88■□□□□ 0.45
HOXD4-201ENST00000306324 TINAGL1Q9GZM7 467 aaPredicted RBP17.88■□□□□ 0.45
HOXD4-201ENST00000306324 COL6A5A8TX70 2615 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 RNF212BA8MTL3 300 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 LINC00205P59089 165 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 RPL15P61313 204 aaKnown RBP17.88■□□□□ 0.45
HOXD4-201ENST00000306324 VAX1Q5SQQ9 334 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 ZNF660Q6AZW8 331 aaPredicted RBP17.88■□□□□ 0.45
HOXD4-201ENST00000306324 STEAP1BQ6NZ63 245 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 OR2T10Q8NGZ9 312 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 EAF1Q96JC9 268 aaPredicted RBP17.88■□□□□ 0.45
HOXD4-201ENST00000306324 C19orf24Q9BVV8 132 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 SLC5A7Q9GZV3 580 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 TAS2R8Q9NYW2 309 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 PTTG2Q9NZH5 202 aa17.88■□□□□ 0.45
HOXD4-201ENST00000306324 ZNF107Q9UII5 783 aaPredicted RBP17.88■□□□□ 0.45
HOXD4-201ENST00000306324 SLC22A5O76082 557 aa17.87■□□□□ 0.45
HOXD4-201ENST00000306324 RAB3DO95716 219 aa17.87■□□□□ 0.45
HOXD4-201ENST00000306324 MOSP00540 346 aa17.87■□□□□ 0.45
HOXD4-201ENST00000306324 TBPP20226 339 aa17.87■□□□□ 0.45
HOXD4-201ENST00000306324 RBM14Q96PK6 669 aaKnown RBP17.87■□□□□ 0.45
HOXD4-201ENST00000306324 CCL28Q9NRJ3 127 aa17.87■□□□□ 0.45
HOXD4-201ENST00000306324 OR5H14A6NHG9 310 aa17.86■□□□□ 0.45
HOXD4-201ENST00000306324 H7C2Y5 167 aa17.86■□□□□ 0.45
HOXD4-201ENST00000306324 OR2F2O95006 317 aa17.86■□□□□ 0.45
HOXD4-201ENST00000306324 EBI3Q14213 229 aa17.86■□□□□ 0.45
HOXD4-201ENST00000306324 ZNF383Q8NA42 475 aa17.86■□□□□ 0.45
HOXD4-201ENST00000306324 OR4D10Q8NGI6 311 aa17.86■□□□□ 0.45
HOXD4-201ENST00000306324 MOB3AQ96BX8 217 aa17.86■□□□□ 0.45
HOXD4-201ENST00000306324 AKR1E2Q96JD6 320 aa17.86■□□□□ 0.45
HOXD4-201ENST00000306324 SRRQ9GZT4 340 aa17.86■□□□□ 0.45
HOXD4-201ENST00000306324 C1RLQ9NZP8 487 aa17.86■□□□□ 0.45
HOXD4-201ENST00000306324 H0YJW9 148 aa17.85■□□□□ 0.45
HOXD4-201ENST00000306324 IGLV2-14P01704 120 aa17.85■□□□□ 0.45
HOXD4-201ENST00000306324 CD74P04233 296 aa17.85■□□□□ 0.45
HOXD4-201ENST00000306324 MC5RP33032 325 aa17.85■□□□□ 0.45
HOXD4-201ENST00000306324 RELBQ01201 579 aa17.85■□□□□ 0.45
HOXD4-201ENST00000306324 FAAP20Q6NZ36 180 aa17.85■□□□□ 0.45
HOXD4-201ENST00000306324 C16orf82Q7Z2V1 217 aa17.85■□□□□ 0.45
HOXD4-201ENST00000306324 OR5AN1Q8NGI8 311 aa17.85■□□□□ 0.45
HOXD4-201ENST00000306324 ANKRD20A5PA0PJZ0 165 aa17.84■□□□□ 0.45
HOXD4-201ENST00000306324 APOA2P02652 100 aa17.84■□□□□ 0.45
HOXD4-201ENST00000306324 AKAIN1P0CW23 69 aa17.84■□□□□ 0.45
HOXD4-201ENST00000306324 HKR1P10072 659 aa17.84■□□□□ 0.45
HOXD4-201ENST00000306324 THBS3P49746 956 aa17.84■□□□□ 0.45
HOXD4-201ENST00000306324 ARRDC1Q8N5I2 433 aa17.84■□□□□ 0.45
HOXD4-201ENST00000306324 NPFFR1Q9GZQ6 430 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms