RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 C18orf12Q96KH6 178 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 PARLQ9H300 379 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 PILRBQ9UKJ0 227 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 TRAV38-1A0A0B4J264 116 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 IGKV1D-13A0A0B4J2D9 117 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 LRRC3CA6NJW4 275 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 SP9P0CG40 484 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 IGKV1-13P0DP09 117 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 CASP6P55212 293 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 TNFRSF9Q07011 255 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 STUMQ69YW2 141 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 TRAT1Q6PIZ9 186 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 DIDO1Q9BTC0 2240 aaKnown RBP11.35□□□□□ -0.59
DDX54-201ENST00000306014 IGLV3-12A0A075B6K2 115 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 SNURFLB1AK76 121 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 ZG16O60844 167 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 CNIH1O95406 144 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 HOXA5P20719 270 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 DEFB109BQ30KR1 87 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 TBX15Q96SF7 602 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 RFNGQ9Y644 331 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 CACNA1GO43497 2377 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 A0A0G2JMM0 328 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 A0A1W2PPB8 328 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 A0A1W2PPE3 182 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 A0A1W2PRS3 328 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 KIR3DP1A8MWS1 328 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 CAMPP49913 170 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 EGLN1Q9GZT9 426 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 C5orf52A6NGY3 159 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 K7N7A8 449 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 UBE2CO00762 179 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 SRSF10O75494 262 aaKnown RBP11.35□□□□□ -0.59
DDX54-201ENST00000306014 SOX8P57073 446 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 MRPS11P82912 194 aaKnown RBP11.35□□□□□ -0.59
DDX54-201ENST00000306014 RNF151Q2KHN1 245 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 HES3Q5TGS1 186 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 MRPL54Q6P161 138 aaKnown RBP11.35□□□□□ -0.59
DDX54-201ENST00000306014 WFDC8Q8IUA0 241 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 FAM131CQ96AQ9 280 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 LOXL4Q96JB6 756 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 BARX1Q9HBU1 254 aaPredicted RBP11.35□□□□□ -0.59
DDX54-201ENST00000306014 A0A1B0GV90 55 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 TOX4O94842 621 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 ZNF25P17030 456 aaPredicted RBP11.35□□□□□ -0.59
DDX54-201ENST00000306014 GZMHP20718 246 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 IL3RAP26951 378 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 SAXO1Q8IYX7 474 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 DRAM1Q8N682 238 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 SLC24A4Q8NFF2 622 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 OR5AU1Q8NGC0 362 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 OR1L6Q8NGR2 347 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 CLDND2Q8NHS1 167 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 VN1R17PQ8TDU5 208 aa11.35□□□□□ -0.59
DDX54-201ENST00000306014 IGKV1-12A0A0C4DH73 117 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 IGKV1D-12P01611 117 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 CTSSP25774 331 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 OPRK1P41145 380 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 RAB7AP51149 207 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 RNASEKQ6P5S7 137 aaKnown RBP11.34□□□□□ -0.59
DDX54-201ENST00000306014 OR10J1P30954 320 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 SLC35B1P78383 322 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 WDR61Q9GZS3 305 aaKnown RBP11.34□□□□□ -0.59
DDX54-201ENST00000306014 HES4Q9HCC6 221 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 PLSCR2Q9NRY7 297 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 COA4Q9NYJ1 87 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 C9JQL5 133 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 RHBDL1O75783 438 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 VAMP3Q15836 100 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 DNM1P46Q6ZS02 220 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 OR8G5Q8NG78 346 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 LSM10Q969L4 123 aaKnown RBP11.34□□□□□ -0.59
DDX54-201ENST00000306014 OR6C3Q9NZP0 311 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 IL17BQ9UHF5 180 aa11.34□□□□□ -0.59
DDX54-201ENST00000306014 ATXN7O15265 892 aaPredicted RBP11.33□□□□□ -0.6
DDX54-201ENST00000306014 KBTBD11O94819 623 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 S1PR2O95136 353 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 CXorf1O96002 111 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 NPY1RP25929 384 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 CFPP27918 469 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 UBE2L3P68036 154 aaKnown RBP11.33□□□□□ -0.6
DDX54-201ENST00000306014 COL10A1Q03692 680 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 FOXC1Q12948 553 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 ICAM4Q14773 271 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 RTP5Q14D33 572 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 ZNF581Q9P0T4 197 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 ZDHHC8Q9ULC8 765 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 HLA-DRB5Q30154 266 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 PXMP4Q9Y6I8 212 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 IGHV3OR15-7A0A075B7D8 119 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 TRAV17A0A0B4J275 112 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 HELTA6NFD8 242 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 SP1P08047 785 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 MST1LQ2TV78 715 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 SSX7Q7RTT5 188 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 ZNF645Q8N7E2 425 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 TMEM56Q96MV1 263 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 NOL4LQ96MY1 436 aaPredicted RBP11.33□□□□□ -0.6
DDX54-201ENST00000306014 PSMG3Q9BT73 122 aaPredicted RBP11.33□□□□□ -0.6
DDX54-201ENST00000306014 IL36GQ9NZH8 169 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms