RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SCGB1D2O95969 90 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 P04436 131 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 NPSP0C0P6 89 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 PATE4P0C8F1 98 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 CCL4P13236 92 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 COX5AP20674 150 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 IL3RAP26951 378 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 GCH1P30793 250 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 MPLP40238 635 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 WNT5AP41221 380 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 PTTG1IPP53801 180 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 ERVFC1-1P60608 527 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 UBE2NP61088 152 aaKnown RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 IGFBP7Q16270 282 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 ZNF674Q2M3X9 581 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 CEACAM16Q2WEN9 425 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 SSX9Q7RTT3 188 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 ZNF573Q86YE8 665 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 OR1K1Q8NGR3 316 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 GPER1Q99527 375 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 ATG101Q9BSB4 218 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 PARLQ9H300 379 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 PLA2G3Q9NZ20 509 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 RNF150Q9ULK6 438 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 POLR1DQ9Y2S0 133 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 SAA2-SAA4A0A096LPE2 208 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 PPP1R2P9O14990 202 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 HRASP01112 189 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 IGLV2-8P01709 118 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 S100A9P06702 114 aaKnown RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 GUCA1AP43080 201 aaPredicted RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 FGF8P55075 233 aaPredicted RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 CASP6P55212 293 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 RPL30P62888 115 aaKnown RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 TMEM267Q0VDI3 215 aaPredicted RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 DCAF12Q5T6F0 453 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 PRAMEF20Q5VT98 475 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 PRSS58Q8IYP2 241 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 C1orf87Q8N0U7 546 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 C17orf78Q8N4C9 275 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 THAP3Q8WTV1 239 aaPredicted RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 TAF15Q92804 592 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS50-202ENST00000305866 RAB1CQ92928 201 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 EXTL1Q92935 676 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 PCGF1Q9BSM1 259 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 TMEM208Q9BTX3 173 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 NAT8Q9UHE5 227 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 OR2W1Q9Y3N9 320 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 SYNGR1O43759 233 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 VENTXO95231 258 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 IGLV1-44P01699 117 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 CA6P23280 308 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 CD1BP29016 333 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 MEF2BQ02080 365 aaPredicted RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 SLC10A1Q14973 349 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 RAET1LQ5VY80 246 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 SUMF1Q8NBK3 374 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 UHRF2Q96PU4 802 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 NIPSNAP3BQ9BS92 247 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 DERL1Q9BUN8 251 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 RBM24Q9BX46 236 aaKnown RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 ZNF552Q9H707 407 aaPredicted RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 C7orf69Q9H7B7 122 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 CLCF1Q9UBD9 225 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 LSM4Q9Y4Z0 139 aaKnown RBP4.54□□□□□ -1.68
VPS50-202ENST00000305866 SVEP1Q4LDE5 3571 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 A0A1B0GV50 99 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 PSMB11A5LHX3 300 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 C15orf62A8K5M9 175 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 J3QT63 122 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 SLC33A1O00400 549 aaPredicted RBP4.53□□□□□ -1.68
VPS50-202ENST00000305866 RAMP3O60896 148 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 LCATP04180 440 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 DEFA4P12838 97 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 KITLGP21583 273 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 CDKN1AP38936 164 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 CYB561P49447 251 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 FAM3BP58499 235 aaPredicted RBP4.53□□□□□ -1.68
VPS50-202ENST00000305866 FXYD4P59646 89 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 RPL23AP62750 156 aaKnown RBP4.53□□□□□ -1.68
VPS50-202ENST00000305866 AKIRIN2Q53H80 203 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 FAM120AOSQ5T036 256 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 BTNL3Q6UXE8 466 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 SPATA12Q7Z6I5 190 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 CMTM1Q8IZ96 169 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 ZNF503Q96F45 646 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 PLPPR2Q96GM1 343 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 WDYHV1Q96HA8 205 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 URB1-AS1Q96HZ7 61 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 MSL2Q9HCI7 577 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 ZFP92A6NM28 416 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 CXCL13O43927 109 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 CD82P27701 267 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 SRP14P37108 136 aaKnown RBP4.53□□□□□ -1.68
VPS50-202ENST00000305866 RBX1P62877 108 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 LCN2P80188 198 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 TFF3Q07654 80 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 HNF4GQ14541 408 aa4.53□□□□□ -1.68
VPS50-202ENST00000305866 CISD2Q8N5K1 135 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms