RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TBX15Q96SF7 602 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 RPLP1P05386 114 aaKnown RBP12.01□□□□□ -0.49
PRKCB-201ENST00000303531 ITLN1Q8WWA0 313 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 GPR146Q96CH1 333 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 TRGC2P03986 189 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 ADRA2AP08913 450 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 LINC01590Q5TEZ4 76 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 GCSAMQ8N6F7 178 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 WNT2BQ93097 391 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 OTOFQ9HC10 1997 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 IGHV3-72A0A0B4J1Y9 119 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 DHRS7CA6NNS2 312 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 MPDU1O75352 247 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 RPL27AP46776 148 aaKnown RBP12.01□□□□□ -0.49
PRKCB-201ENST00000303531 FGFRL1Q8N441 504 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 HS3ST3B1Q9Y662 390 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 CD99P14209 185 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 PRF1P14222 555 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 CLDN18P56856 261 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 ZNF273Q14593 569 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 WFDC3Q8IUB2 231 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 DLL3Q9NYJ7 618 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 IFITM2Q01629 132 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 CD81P60033 236 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 MYOZ3Q8TDC0 251 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 TAF15Q92804 592 aaKnown RBP eCLIP12□□□□□ -0.49
PRKCB-201ENST00000303531 PTPRFP10586 1907 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 BPIFA4PQ86YQ2 179 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 LOC389332A0A1B0GUA5 103 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 ZNF25P17030 456 aaPredicted RBP12□□□□□ -0.49
PRKCB-201ENST00000303531 ELOVL1Q9BW60 279 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 LINC00869P0C866 280 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 RHOVQ96L33 236 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 SRXN1Q9BYN0 137 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 IFITM10A6NMD0 228 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 UNC119Q13432 240 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 SPANXN1Q5VSR9 72 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 RBM14Q96PK6 669 aaKnown RBP12□□□□□ -0.49
PRKCB-201ENST00000303531 HILPDAQ9Y5L2 63 aa12□□□□□ -0.49
PRKCB-201ENST00000303531 HOXA4Q00056 320 aaPredicted RBP11.99□□□□□ -0.49
PRKCB-201ENST00000303531 ZNF343Q6P1L6 599 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 Q96M66 194 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 PRR33A8MZF0 331 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 ERVFRD-1P60508 538 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 SRSF9Q13242 221 aaKnown RBP eCLIP11.99□□□□□ -0.49
PRKCB-201ENST00000303531 Q5BKY6 102 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 DIRC2Q96SL1 478 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 A6NDN8 102 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 NKX2-8O15522 239 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 ZNF735P0CB33 412 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 SLC25A33Q9BSK2 321 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 PLAUP00749 431 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 MIC13Q5XKP0 118 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 PKIBQ9C010 78 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 IBA57Q5T440 356 aaKnown RBP11.99□□□□□ -0.49
PRKCB-201ENST00000303531 HCP5Q6MZN7 132 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 DDA1Q9BW61 102 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 RGPD3A6NKT7 1758 aaPredicted RBP11.99□□□□□ -0.49
PRKCB-201ENST00000303531 LRRC75BQ2VPJ9 315 aa11.99□□□□□ -0.49
PRKCB-201ENST00000303531 ZNF552Q9H707 407 aaPredicted RBP11.99□□□□□ -0.49
PRKCB-201ENST00000303531 H0YL77 283 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 RARRES2Q99969 163 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 SH3BGRL3Q9H299 93 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 IL17BQ9UHF5 180 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 C17orf51A8MQB3 221 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 COX6A1P12074 109 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 GPR6P46095 362 aaPredicted RBP11.98□□□□□ -0.49
PRKCB-201ENST00000303531 OR8G5Q8NG78 346 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 SAP25Q8TEE9 199 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 EGR4Q05215 589 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 TWIST1Q15672 202 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 ZNF841Q6ZN19 808 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 SSX8Q7RTT4 187 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 OR4C12Q96R67 309 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 TLNRD1Q9H1K6 362 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 TCTAP57738 103 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 RPL8P62917 257 aaKnown RBP11.98□□□□□ -0.49
PRKCB-201ENST00000303531 IGHMP01871 453 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 ID4P47928 161 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 PAFAH1B2P68402 229 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 A8MWL6 223 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 AHRRA9YTQ3 701 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 KCNMB1Q16558 191 aa11.98□□□□□ -0.49
PRKCB-201ENST00000303531 METTL1Q9UBP6 276 aaKnown RBP11.98□□□□□ -0.49
PRKCB-201ENST00000303531 MC5RP33032 325 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 HSPB9Q9BQS6 159 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 IGLV3-21P80748 117 aaPredicted RBP11.97□□□□□ -0.49
PRKCB-201ENST00000303531 RIPPLY2Q5TAB7 128 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 PET117Q6UWS5 81 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 SCNM1Q9BWG6 230 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 ODAMA1E959 279 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 OR4C46A6NHA9 309 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 EPOPA6NHQ4 379 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 DLL1O00548 723 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 CDCP2Q5VXM1 449 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 EAF1Q96JC9 268 aaPredicted RBP11.97□□□□□ -0.49
PRKCB-201ENST00000303531 WNT5BQ9H1J7 359 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 FAM181AQ8N9Y4 354 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 SCARF2Q96GP6 870 aaPredicted RBP11.97□□□□□ -0.49
PRKCB-201ENST00000303531 CD74P04233 296 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms