RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PRNTQ86SH4 94 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 OR1K1Q8NGR3 316 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 OR2J1Q9GZK6 312 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF430Q9H8G1 570 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-201ENST00000302516 SERGEFQ9UGK8 458 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 LRRC75BQ2VPJ9 315 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 GALNT14Q96FL9 552 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 PKIBQ9C010 78 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 FRMPD3Q5JV73 1810 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 THADAQ6YHU6 1953 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 CEACAM18A8MTB9 384 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 MGPP08493 103 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 AGAP20933 346 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 PDCD1Q15116 288 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 TCF24Q7RTU0 167 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 GGACTQ9BVM4 153 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 RBKSQ9H477 322 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 LHX9Q9NQ69 397 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 SOX21Q9Y651 276 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-201ENST00000302516 A0A1W2PPV9 198 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 NPBWR2P48146 333 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 GUSBP11Q6P575 273 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 FAM206AQ9NX38 181 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 PRR13Q9NZ81 148 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 DRD3P35462 400 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 PPP1CCP36873 323 aaKnown RBP6.63□□□□□ -1.35
SF3B3-201ENST00000302516 UCP3P55916 312 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 NANOS3P60323 173 aaKnown RBP6.63□□□□□ -1.35
SF3B3-201ENST00000302516 RPS4XP62701 263 aaKnown RBP6.63□□□□□ -1.35
SF3B3-201ENST00000302516 PAPPA-AS1Q5QFB9 102 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 C9orf40Q8IXQ3 194 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 CA5BP1Q8WTZ4 195 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 HIST1H4GQ99525 98 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 TREM2Q9NZC2 230 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 IL36RNQ9UBH0 155 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 GPR132Q9UNW8 380 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 YBX2Q9Y2T7 364 aaKnown RBP6.63□□□□□ -1.35
SF3B3-201ENST00000302516 TRAV30A0A087WSZ9 112 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 SLC25A10Q9UBX3 287 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF318Q5VUA4 2279 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 A0A1W2PS18 150 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 LMX1BO60663 402 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 SCGB1A1P11684 91 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 RND1Q92730 232 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 TAF15Q92804 592 aaKnown RBP eCLIP6.63□□□□□ -1.35
SF3B3-201ENST00000302516 SPSB4Q96A44 273 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 PCGF1Q9BSM1 259 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 HSPB7Q9UBY9 170 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 TCFL5Q9UL49 500 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 INSIG2Q9Y5U4 225 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 SHISA7A6NL88 538 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 J3QW42 95 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 SS18L1O75177 396 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-201ENST00000302516 MAS1LP35410 378 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 TMEM78Q5T7P6 136 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 OR10S1Q8NGN2 331 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 FOXQ1Q9C009 403 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 FANCMQ8IYD8 2048 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 CDIPTO14735 213 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 FAM222BQ8WU58 562 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 CT55Q8WUE5 264 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 C17orf51A8MQB3 221 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 WNT9BO14905 357 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 COX7A1P24310 79 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 CKS2P33552 79 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 IFITM3Q01628 133 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 MOGAT3Q86VF5 341 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 TEX29Q8N6K0 151 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 OR10J6PQ8NGY7 276 aa6.63□□□□□ -1.35
SF3B3-201ENST00000302516 NPIPB6E9PJ23 425 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 NDUFB4O95168 129 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 MT-CO3P00414 261 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 ARL14EPLP0DKL9 152 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 TAS2R60P59551 318 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 TUSC5Q8IXB3 177 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF714Q96N38 554 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 WDR90Q96KV7 1748 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 LOC390937A0A1W2PQ73 354 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 EML2O95834 649 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 TNFRSF9Q07011 255 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 AESQ08117 197 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 OR4A5Q8NH83 315 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 RPL8P62917 257 aaKnown RBP6.62□□□□□ -1.35
SF3B3-201ENST00000302516 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-201ENST00000302516 MGAMO43451 1857 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 SMIM13P0DJ93 91 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 P2RY6Q15077 328 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 MRPL13Q9BYD1 178 aaKnown RBP6.62□□□□□ -1.35
SF3B3-201ENST00000302516 ARRDC1-AS1Q9H2J1 176 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 R3HDMLQ9H3Y0 253 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 IGHV1OR15-9A0A0B4J2B8 117 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 RBFOX2O43251 390 aaKnown RBP eCLIP6.62□□□□□ -1.35
SF3B3-201ENST00000302516 CCL2P13500 99 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 ADIPOQQ15848 244 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 C5orf66Q9H5L9 145 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 ZDHHC8Q9ULC8 765 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 MGST3O14880 152 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 SIGLEC5O15389 551 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 IGFBP6P24592 240 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms