RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 AMMECR1Q9Y4X0 333 aaPredicted RBP12.28□□□□□ -0.44
UBXN1-202ENST00000301935 IGHV2-26A0A0B4J1V2 119 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 RAB29O14966 203 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 OR8U9P0C7N5 309 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 CCR6P51684 374 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 UBE2E1P51965 193 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 FXYD4P59646 89 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 BPIFB3P59826 476 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 TRIM16LQ309B1 348 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 CT45A1Q5HYN5 189 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 BCL6BQ8N143 479 aaPredicted RBP12.27□□□□□ -0.45
UBXN1-202ENST00000301935 ZNF645Q8N7E2 425 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 OR8U1Q8NH10 309 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 CT45A3Q8NHU0 189 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 CHPT1Q8WUD6 406 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 AGMATQ9BSE5 352 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 RSRP1Q9BUV0 290 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 GPR132Q9UNW8 380 aa12.27□□□□□ -0.45
UBXN1-202ENST00000301935 C14orf166Q9Y224 244 aaKnown RBP12.27□□□□□ -0.45
UBXN1-202ENST00000301935 GPR31O00270 319 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 CTSDP07339 412 aaPredicted RBP12.26□□□□□ -0.45
UBXN1-202ENST00000301935 GPR12P47775 334 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 TAS2R31P59538 309 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 UBE2MP61081 183 aaKnown RBP12.26□□□□□ -0.45
UBXN1-202ENST00000301935 DEFA6Q01524 100 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 OXA1LQ15070 435 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 FAM71F2Q6NXP2 309 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 CCDC71LQ8N9Z2 235 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 OR10X1Q8NGY0 326 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 MARCH1Q8TCQ1 289 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 SECTM1Q8WVN6 248 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 TOMM40LQ969M1 308 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 UPRTQ96BW1 309 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 S1PR3Q99500 378 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 PCGF1Q9BSM1 259 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 ALX4Q9H161 411 aaPredicted RBP12.26□□□□□ -0.45
UBXN1-202ENST00000301935 MMP28Q9H239 520 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 CMYA5Q8N3K9 4069 aa12.26□□□□□ -0.45
UBXN1-202ENST00000301935 CLDN34H7C241 214 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 B3GALNT1O75752 331 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 IGLV1-47P01700 117 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 H2AFB2P0C5Z0 115 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 GNRHRP30968 328 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 CEACAM3P40198 252 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 ZNF134P52741 427 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 ZNF137PP52743 207 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 RND3P61587 244 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 HLA-DRB5Q30154 266 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 ABCA11PQ4W5N1 156 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 MINOS1Q5TGZ0 78 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 ZNF626Q68DY1 528 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 PNKDQ8N490 385 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 BVESQ8NE79 360 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 TBX15Q96SF7 602 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 MARVELD1Q9BSK0 173 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 FXYD6Q9H0Q3 95 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 SIRT7Q9NRC8 400 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 MINOS1-NBL1R4GNA1 71 aa12.25□□□□□ -0.45
UBXN1-202ENST00000301935 IGKV1D-13A0A0B4J2D9 117 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 DHFRP00374 187 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 RLN1P04808 185 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 IGKV1-13P0DP09 117 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 GNG10P50151 68 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 MECP2P51608 486 aaKnown RBP12.24□□□□□ -0.45
UBXN1-202ENST00000301935 LGALS4P56470 323 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 TAGLNQ01995 201 aaKnown RBP12.24□□□□□ -0.45
UBXN1-202ENST00000301935 SLC9A3R2Q15599 337 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 MIDNQ504T8 468 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 CCBE1Q6UXH8 406 aaPredicted RBP12.24□□□□□ -0.45
UBXN1-202ENST00000301935 CENPSQ8N2Z9 138 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 TCTEX1D1Q8N7M0 179 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 LEAP2Q969E1 77 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 MRGPRFQ96AM1 343 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 ADTRPQ96IZ2 230 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 MS4A7Q9GZW8 240 aaPredicted RBP12.24□□□□□ -0.45
UBXN1-202ENST00000301935 C20orf85Q9H1P6 137 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 OR2D2Q9H210 308 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 IFI27L2Q9H2X8 130 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 NUDT15Q9NV35 164 aa12.24□□□□□ -0.45
UBXN1-202ENST00000301935 TBL2Q9Y4P3 447 aaKnown RBP12.24□□□□□ -0.45
UBXN1-202ENST00000301935 PIGBOS1A0A0B4J2F0 54 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 ODF3BA8MYP8 253 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 LEUTXA8MZ59 168 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 OOSP1A8MZH6 123 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 BUB1B-PAK6H3BSN5 160 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 ST8SIA5O15466 376 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 TXNL1O43396 289 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 PRAF2O60831 178 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 PEX14O75381 377 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 IGHV4-38-2P0DP08 117 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 COX7A1P24310 79 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 HTR1DP28221 377 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 TMEM128Q5BJH2 165 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 GPR157Q5UAW9 335 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 ZNF66Q6ZN08 573 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 C9orf139Q6ZV77 190 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 KCTD9Q7L273 389 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 SLC25A42Q86VD7 318 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 LYG1Q8N1E2 194 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 TAF15Q92804 592 aaKnown RBP eCLIP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms