RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 ARL16Q0P5N6 197 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 IL13RA2Q14627 380 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 FGFRL1Q8N441 504 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 PLSCR2Q9NRY7 297 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 POLDIP2Q9Y2S7 368 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 MALRD1Q5VYJ5 2156 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 C12orf77C9JDV5 145 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 SYNGR2O43760 224 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 PRB4P10163 310 aaPredicted RBP13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 RND3P61587 244 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 RPL30P62888 115 aaKnown RBP13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 CCL8P80075 99 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 FAM27E3Q08E93 113 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 OR13A1Q8NGR1 328 aa13.14□□□□□ -0.31
CHAF1A-201ENST00000301280 OR5B21A6NL26 309 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 C17orf98A8MV24 154 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 OR2C1O95371 312 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 MT-ND4LP03901 98 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 DANCRP0C864 163 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 ZNF883P0CG24 379 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 RAB5AP20339 215 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 WFDC8Q8IUA0 241 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 MLNRO43193 412 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 CDS2O95674 445 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 DUX4L9Q6RFH8 374 aaPredicted RBP13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 TGIF2LYQ8IUE0 185 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 SNRNP40Q96DI7 357 aaKnown RBP13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 TAAR6Q96RI8 345 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 GFOD1Q9NXC2 390 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 DCAF16Q9NXF7 216 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 METTL1Q9UBP6 276 aaKnown RBP13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 LRP5LA4QPB2 252 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 IFNA10P01566 189 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 APELAP0DMC3 54 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 RNF212Q495C1 297 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 ZNF561Q8N587 486 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 OR4D5Q8NGN0 318 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 RPRMQ9NS64 109 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 PROCRQ9UNN8 238 aa13.13□□□□□ -0.31
CHAF1A-201ENST00000301280 RBFOX3A6NFN3 312 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 ZG16O60844 167 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 SULT1A1P50225 295 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 RPL39P5Q59GN2 51 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 Q6ZR03 302 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 M0R1X1 148 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 IGHV3-48P01763 117 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 NKX6-1P78426 367 aaPredicted RBP13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 UTF1Q5T230 341 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 SAXO1Q8IYX7 474 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 YPEL4Q96NS1 127 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 CSMD1Q96PZ7 3565 aa13.12□□□□□ -0.31
CHAF1A-201ENST00000301280 KIR2DL2P43627 348 aaPredicted RBP13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 NDUFA6P56556 154 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 ADIRFQ15847 76 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 GMPPAQ96IJ6 420 aaPredicted RBP13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 OR4C12Q96R67 309 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 KPTNQ9Y664 436 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 YIF1AO95070 293 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 IGKV1-39P01597 117 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 IGKV1-5P01602 117 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 IGKV1D-39P04432 117 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 COX5BP10606 129 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 GABRA6Q16445 453 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 ZNF718Q3SXZ3 478 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 ZNF324BQ6AW86 544 aaPredicted RBP13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 ZNF787Q6DD87 383 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 ZNF880Q6PDB4 577 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 H2BFWTQ7Z2G1 175 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 GATAD1Q8WUU5 269 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 SLC35B3Q9H1N7 401 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 S100A8P05109 93 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 SRPXP78539 464 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 CST9LP1Q5W188 147 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 ZNF429Q86V71 674 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 CISD2Q8N5K1 135 aaKnown RBP13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 RND1Q92730 232 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 LHX4Q969G2 390 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 LYRM2Q9NU23 88 aaPredicted RBP13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 SLC39A9Q9NUM3 307 aa13.11□□□□□ -0.31
CHAF1A-201ENST00000301280 TRAV17A0A0B4J275 112 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 H3BQ15 152 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 CRYAAP02489 173 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 MYOD1P15172 320 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 NDUFB7P17568 137 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 REG1BP48304 166 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 FAM208BQ5VWN6 2430 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 SCAF4O95104 1147 aaKnown RBP13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 WNT2P09544 360 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 CTXN2P0C2S0 81 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 SEC11BP0C7V7 166 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 RAB2AP61019 212 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 GCSAMLQ5JQS6 135 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 SP5Q6BEB4 398 aaPredicted RBP13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 S100PBPQ96BU1 408 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 SARAFQ96BY9 339 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 PATZ1Q9HBE1 687 aaKnown RBP13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 HEYLQ9NQ87 328 aaPredicted RBP13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 ZADH2Q8N4Q0 377 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms