RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 KLF14Q8TD94 323 aaPredicted RBP10.86□□□□□ -0.67
HIF3A-204ENST00000300862 GMPPAQ96IJ6 420 aaPredicted RBP10.86□□□□□ -0.67
HIF3A-204ENST00000300862 DFFBO76075 338 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 CEACAM1P13688 526 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 RPS16P62249 146 aaKnown RBP10.85□□□□□ -0.67
HIF3A-204ENST00000300862 FGFRL1Q8N441 504 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 SCGB1C1Q8TD33 95 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 ZNF665Q9H7R5 613 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 HEATR1Q9H583 2144 aaKnown RBP10.85□□□□□ -0.67
HIF3A-204ENST00000300862 NPIPB11E5RHQ5 1161 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 MLNRO43193 412 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 KRASP01116 189 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 MDH2P40926 338 aaKnown RBP10.85□□□□□ -0.67
HIF3A-204ENST00000300862 GLIPR1P48060 266 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 TNFSF10P50591 281 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 ELLP55199 621 aaPredicted RBP10.85□□□□□ -0.67
HIF3A-204ENST00000300862 NKX6-1P78426 367 aaPredicted RBP10.85□□□□□ -0.67
HIF3A-204ENST00000300862 TGFBR3Q03167 851 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 ZNF816Q0VGE8 651 aaPredicted RBP10.85□□□□□ -0.67
HIF3A-204ENST00000300862 ZNF146Q15072 292 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 ZNF506Q5JVG8 444 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 PRAMEF6Q5VXH4 476 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 OR8G2PQ6IF36 304 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 ZNF525Q8N782 197 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 TMEM178AQ8NBL3 297 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 ABHD5Q8WTS1 349 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 FRZBQ92765 325 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 TVP23CQ96ET8 276 aa10.85□□□□□ -0.67
HIF3A-204ENST00000300862 MBNL3Q9NUK0 354 aaKnown RBP10.85□□□□□ -0.67
HIF3A-204ENST00000300862 INTS1Q8N201 2190 aaKnown RBP10.85□□□□□ -0.67
HIF3A-204ENST00000300862 ELOA3CA0A087WX78 387 aaPredicted RBP10.84□□□□□ -0.67
HIF3A-204ENST00000300862 BTBD17A6NE02 478 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 OR5H1A6NKK0 313 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 TRGC1P0CF51 173 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 FABP4P15090 132 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 DDTP30046 118 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 G6PCP35575 357 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 RPL30P62888 115 aaKnown RBP10.84□□□□□ -0.67
HIF3A-204ENST00000300862 ZNF726P1Q15940 193 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 VWA1Q6PCB0 445 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 BTNL3Q6UXE8 466 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 Q6ZR03 302 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 MOB1BQ7L9L4 216 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 SSX9Q7RTT3 188 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 REC114Q7Z4M0 266 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 Q8IYB0 196 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 LSM10Q969L4 123 aaKnown RBP10.84□□□□□ -0.67
HIF3A-204ENST00000300862 C5orf30Q96GV9 206 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 OR2D2Q9H210 308 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 PRO1933Q9H354 126 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 MSL2Q9HCI7 577 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 TMEM9BQ9NQ34 198 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 SIRT7Q9NRC8 400 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 LIN7CQ9NUP9 197 aaKnown RBP10.84□□□□□ -0.67
HIF3A-204ENST00000300862 CBY1Q9Y3M2 126 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 C12orf77C9JDV5 145 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 HSPB1P04792 205 aaKnown RBP10.84□□□□□ -0.67
HIF3A-204ENST00000300862 SLC25A6P12236 298 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 PCP4P48539 62 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 FABP6P51161 128 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 GABRA6Q16445 453 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 FDCSPQ8NFU4 85 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 MRGPRDQ8TDS7 321 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 NIPSNAP3BQ9BS92 247 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
HIF3A-204ENST00000300862 IGHV3-43A0A0B4J1X8 118 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 CD55P08174 381 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 IGHV3-43DP0DP04 118 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 RAB11AP62491 216 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 OR13D1Q8NGV5 346 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 RFESDQ8TAC1 157 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 SNIP1Q8TAD8 396 aaKnown RBP10.83□□□□□ -0.68
HIF3A-204ENST00000300862 PLPPR2Q96GM1 343 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 OR4C12Q96R67 309 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 WIPI2Q9Y4P8 454 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 MGAQ8IWI9 3026 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 CEP250Q9BV73 2442 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 UBE2L5PA0A1B0GUS4 154 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 IQCF6A8MYZ5 107 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 HMGB3O15347 200 aaKnown RBP10.83□□□□□ -0.68
HIF3A-204ENST00000300862 PTBP3O95758 552 aaKnown RBP10.83□□□□□ -0.68
HIF3A-204ENST00000300862 CLDN1O95832 211 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 IL2RGP31785 369 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 PKIAP61925 76 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 SPINK9Q5DT21 86 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 DNLZQ5SXM8 178 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 ZNF787Q6DD87 383 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 CFAP161Q6P656 301 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 FAM214BQ7L5A3 538 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 SLC35E3Q7Z769 313 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 C11orf53Q8IXP5 236 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 KCNIP1Q9NZI2 227 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 CLCF1Q9UBD9 225 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 CACNA1GO43497 2377 aa10.83□□□□□ -0.68
HIF3A-204ENST00000300862 DEFB108AA8MXU0 73 aa10.82□□□□□ -0.68
HIF3A-204ENST00000300862 PHOX2AO14813 284 aa10.82□□□□□ -0.68
HIF3A-204ENST00000300862 NDUFB7P17568 137 aa10.82□□□□□ -0.68
HIF3A-204ENST00000300862 GABRA2P47869 451 aa10.82□□□□□ -0.68
HIF3A-204ENST00000300862 FOXF2Q12947 444 aa10.82□□□□□ -0.68
HIF3A-204ENST00000300862 LTC4SQ16873 150 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms