RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SRD5A2P31213 254 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 ZAR1Q86SH2 424 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 LINC00470Q9BZP3 86 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 TMEM222Q9H0R3 208 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 ZNF576Q9H609 170 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 CLEC1BQ9P126 229 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 CGB1A6NKQ9 187 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 GDF9O60383 454 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 ZIC1Q15915 447 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 FAM53AQ6NSI3 398 aaPredicted RBP12.89□□□□□ -0.35
SCN3B-201ENST00000299333 OR52M1Q8NGK5 317 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 CYSLTR1Q9Y271 337 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 R4GN57 208 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 RREB1Q92766 1687 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 MKRN2OSH3BPM6 223 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 IGHV4-34P06331 123 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 ARL14EPLP0DKL9 152 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 GABRG2P18507 467 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 KCNS1Q96KK3 526 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 TRAV8-6A0A0B4J262 113 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 CXorf51AA0A1B0GTR3 108 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 H0Y980 276 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 F2RL2O00254 374 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 RAC3P60763 192 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 COPS9Q8WXC6 57 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 ABHD14BQ96IU4 210 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 ECSCRQ19T08 205 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 PRSS27Q9BQR3 290 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 IGKV3D-15A0A087WSY6 115 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 IGKV3-15P01624 115 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 DANCRP0C864 163 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 CRYBB3P26998 211 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 SERGEFQ9UGK8 458 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 PHIPQ8WWQ0 1821 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 MPDU1O75352 247 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 TMEM78Q5T7P6 136 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 SRSF12Q8WXF0 261 aaKnown RBP12.88□□□□□ -0.35
SCN3B-201ENST00000299333 HILPDAQ9Y5L2 63 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 SHROOM3Q8TF72 1996 aa12.88□□□□□ -0.35
SCN3B-201ENST00000299333 A0A1W2PP11 408 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 AGFG2O95081 481 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 TFPI2P48307 235 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 SPAG17Q6Q759 2223 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 BGLAPP02818 100 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 TMEM262E9PQX1 116 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 EML2O95834 649 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 BHLHA15Q7RTS1 189 aaPredicted RBP12.87□□□□□ -0.35
SCN3B-201ENST00000299333 LINC00596Q86U02 117 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 SSBP3Q9BWW4 388 aaPredicted RBP12.87□□□□□ -0.35
SCN3B-201ENST00000299333 TMEM160Q9NX00 188 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 HRKO00198 91 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 TPTE2P1Q5T6R2 138 aa12.87□□□□□ -0.35
SCN3B-201ENST00000299333 MBNL2Q5VZF2 373 aaKnown RBP12.87□□□□□ -0.35
SCN3B-201ENST00000299333 APOMO95445 188 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 FCGR2BP31994 310 aaPredicted RBP12.86□□□□□ -0.35
SCN3B-201ENST00000299333 MMDQ15546 238 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 C3AR1Q16581 482 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 ISXQ2M1V0 245 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 MEIG1Q5JSS6 88 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 CCL27Q9Y4X3 112 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 TRAV17A0A0B4J275 112 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 CIRBPQ14011 172 aaKnown RBP12.86□□□□□ -0.35
SCN3B-201ENST00000299333 TPRX1Q8N7U7 411 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 SCNM1Q9BWG6 230 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 TRBV9A0A0B4J1U6 114 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 UBE2L6O14933 153 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 CA11O75493 328 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 NFAM1Q8NET5 270 aaPredicted RBP12.86□□□□□ -0.35
SCN3B-201ENST00000299333 RNF7Q9UBF6 113 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 FAM90A27PA6NNH2 459 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 NPIPB6E9PJ23 425 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 DLEU1O43261 78 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 SCTP09683 121 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 GZMMP51124 257 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 DLX6P56179 175 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 C5orf30Q96GV9 206 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 GPHA2Q96T91 129 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 SPSB2Q99619 263 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 ARAP2Q8WZ64 1704 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 ID1P41134 155 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 C1RLQ9NZP8 487 aa12.86□□□□□ -0.35
SCN3B-201ENST00000299333 TRAV8-4A0A0B4J246 113 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 ZIC3O60481 467 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 EGR1P18146 543 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 CTGFP29279 349 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 COL10A1Q03692 680 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 GGTLC2Q14390 218 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 GUSBP11Q6P575 273 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 LIMS2Q7Z4I7 341 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 SELENOHQ8IZQ5 122 aaKnown RBP12.85□□□□□ -0.35
SCN3B-201ENST00000299333 FAM60AQ9NP50 221 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 NUP205Q92621 2012 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 A0A1W2PQD3 144 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 SPINK14Q6IE38 97 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 GPR146Q96CH1 333 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 SF3B5Q9BWJ5 86 aaKnown RBP12.85□□□□□ -0.35
SCN3B-201ENST00000299333 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 CLDN14O95500 239 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 C1QCP02747 245 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 ISG15P05161 165 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms