RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CFAP54Q96N23 3096 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 SNURFLB1AK76 121 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 PGLYRP1O75594 196 aaPredicted RBP12.69□□□□□ -0.38
SPIDR-201ENST00000297423 ADMP35318 185 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 ZP4Q12836 540 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 DCAF10Q5QP82 559 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 FAM58AQ8N1B3 248 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 TAF15Q92804 592 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPIDR-201ENST00000297423 STRADBQ9C0K7 418 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 NAPSAO96009 420 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 COX5AP20674 150 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 NUFIP2Q7Z417 695 aaKnown RBP12.69□□□□□ -0.38
SPIDR-201ENST00000297423 R3HDM4Q96D70 268 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 MRGPRX4Q96LA9 322 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 MRPL13Q9BYD1 178 aaKnown RBP12.69□□□□□ -0.38
SPIDR-201ENST00000297423 TIAF1O95411 115 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 PDLIM3Q53GG5 364 aaPredicted RBP12.68□□□□□ -0.38
SPIDR-201ENST00000297423 UNQ5815/PRO19632Q6UWF5 114 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 RPP25LQ8N5L8 163 aaKnown RBP12.68□□□□□ -0.38
SPIDR-201ENST00000297423 OR10P1Q8NGE3 313 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 PINX1Q96BK5 328 aaKnown RBP12.68□□□□□ -0.38
SPIDR-201ENST00000297423 F2RP25116 425 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 ATP5G3P48201 142 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 VHLLQ6RSH7 139 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 ZNF573Q86YE8 665 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 CISD2Q8N5K1 135 aaKnown RBP12.68□□□□□ -0.38
SPIDR-201ENST00000297423 OR5L2Q8NGL0 311 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 MIEN1Q9BRT3 115 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 ANAPC10Q9UM13 185 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 IL11RAQ14626 422 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 AAED1Q7RTV5 226 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 FAM19A2Q8N3H0 131 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 ZNF596Q8TC21 504 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 BORCS7Q96B45 105 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 ASCL3Q9NQ33 180 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 TMEM106BQ9NUM4 274 aa12.68□□□□□ -0.38
SPIDR-201ENST00000297423 IGKV3D-11A0A0A0MRZ8 115 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 LY6G6EA0A0G2JKS1 128 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 TP53I11O14683 189 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 LILRA1O75019 489 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 GCSAMLQ5JQS6 135 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 Q6ZRM9 215 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 OR1F12Q8NHA8 337 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 C22orf15Q8WYQ4 148 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 U3KQA8 63 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 KIR2DS1A0A191URI9 304 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 IGHV3-13P01766 116 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 IGHV3-7P01780 117 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 BRS3P32247 399 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 KIR2DS4P43632 304 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 RBM11P57052 281 aaKnown RBP12.67□□□□□ -0.38
SPIDR-201ENST00000297423 ID3Q02535 119 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 KIR2DS1Q14954 304 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 MRPL54Q6P161 138 aaKnown RBP12.67□□□□□ -0.38
SPIDR-201ENST00000297423 ST6GALNAC6Q969X2 333 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 ANAPC16Q96DE5 110 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 TMEM131Q92545 1883 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 LAMA1P25391 3075 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 FUT6P51993 359 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 CEACAM16Q2WEN9 425 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
SPIDR-201ENST00000297423 ZNF253O75346 499 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 ZFAND5O76080 213 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 G6PCP35575 357 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 RNASEH2CQ8TDP1 164 aaKnown RBP12.66□□□□□ -0.38
SPIDR-201ENST00000297423 OR1A1Q9P1Q5 309 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 CLCF1Q9UBD9 225 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 CCL4P13236 92 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 CDC34P49427 236 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-201ENST00000297423 PLPPR5Q32ZL2 321 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 SPATA46Q5T0L3 261 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 ANKRD37Q7Z713 158 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 ZNF525Q8N782 197 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 PLPPR1Q8TBJ4 325 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 PNRC2Q9NPJ4 139 aaKnown RBP12.66□□□□□ -0.38
SPIDR-201ENST00000297423 ACTL6BO94805 426 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 TFF3Q07654 80 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 RNASE8Q8TDE3 154 aaKnown RBP12.66□□□□□ -0.38
SPIDR-201ENST00000297423 MRPL18Q9H0U6 180 aaKnown RBP12.66□□□□□ -0.38
SPIDR-201ENST00000297423 MTCH1Q9NZJ7 389 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 TAAR3PQ9P1P4 343 aa12.66□□□□□ -0.38
SPIDR-201ENST00000297423 OTX1P32242 354 aaPredicted RBP12.65□□□□□ -0.38
SPIDR-201ENST00000297423 PEAR1Q5VY43 1037 aaPredicted RBP12.65□□□□□ -0.38
SPIDR-201ENST00000297423 OR8G5Q8NG78 346 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 SLC35E1Q96K37 410 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 P2RX4Q99571 388 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 PPP1R14DQ9NXH3 145 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 NUP210LQ5VU65 1888 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 CPEB3Q8NE35 698 aaKnown RBP12.65□□□□□ -0.38
SPIDR-201ENST00000297423 OR10G8Q8NGN5 311 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 A8MXE2 369 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 CBR3O75828 277 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 PAX9P55771 341 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 ZFP36L1Q07352 338 aaKnown RBP12.65□□□□□ -0.38
SPIDR-201ENST00000297423 ACSM6Q6P461 480 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 LRTM2Q8N967 370 aa12.65□□□□□ -0.38
SPIDR-201ENST00000297423 WDR61Q9GZS3 305 aaKnown RBP12.65□□□□□ -0.38
SPIDR-201ENST00000297423 C5orf49A4QMS7 147 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 CELA2AP08217 269 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms