RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 EFNB3Q15768 340 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 ZNF672Q499Z4 452 aaPredicted RBP17.7■□□□□ 0.42
SOX17-201ENST00000297316 C4orf17Q53FE4 359 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 ODF3L1Q8IXM7 274 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 SEBOXQ9HB31 216 aaPredicted RBP17.7■□□□□ 0.42
SOX17-201ENST00000297316 USF3Q68DE3 2245 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 TMEM218A2RU14 115 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 B9A039 149 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 GPR157Q5UAW9 335 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 TEX36Q5VZQ5 186 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 MUC15Q8N387 334 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 ITLN2Q8WWU7 325 aaPredicted RBP17.7■□□□□ 0.42
SOX17-201ENST00000297316 NINJ1Q92982 152 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 SDSLQ96GA7 329 aa17.7■□□□□ 0.42
SOX17-201ENST00000297316 LIN7CQ9NUP9 197 aaKnown RBP17.7■□□□□ 0.42
SOX17-201ENST00000297316 ST8SIA5O15466 376 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 GAPDHP04406 335 aaKnown RBP17.69■□□□□ 0.42
SOX17-201ENST00000297316 OMGP23515 440 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 LINC00205P59089 165 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 EWSR1Q01844 656 aaKnown RBP eCLIP17.69■□□□□ 0.42
SOX17-201ENST00000297316 SWI5Q1ZZU3 235 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 OR2B11Q5JQS5 317 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 BTNL3Q6UXE8 466 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 ZNF788Q6ZQV5 615 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 ZNF561Q8N587 486 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 OR2C3Q8N628 320 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 PPP1R35Q8TAP8 253 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 ABHD14BQ96IU4 210 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 MS4A5Q9H3V2 200 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 PLEKHF2Q9H8W4 249 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 KIAA1324LA8MWY0 1029 aaPredicted RBP17.69■□□□□ 0.42
SOX17-201ENST00000297316 TMEM178BH3BS89 294 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 RAMP3O60896 148 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 FBXO24O75426 580 aa17.69■□□□□ 0.42
SOX17-201ENST00000297316 TSNAXQ99598 290 aaKnown RBP17.69■□□□□ 0.42
SOX17-201ENST00000297316 COL12A1Q99715 3063 aa17.68■□□□□ 0.42
SOX17-201ENST00000297316 LRRC30A6NM36 301 aa17.68■□□□□ 0.42
SOX17-201ENST00000297316 IGHV3-7P01780 117 aa17.68■□□□□ 0.42
SOX17-201ENST00000297316 BRWD1-AS2P59051 145 aa17.68■□□□□ 0.42
SOX17-201ENST00000297316 UTF1Q5T230 341 aa17.68■□□□□ 0.42
SOX17-201ENST00000297316 ZNF295-AS1Q8N0V1 137 aa17.68■□□□□ 0.42
SOX17-201ENST00000297316 RNF141Q8WVD5 230 aa17.68■□□□□ 0.42
SOX17-201ENST00000297316 TMEM106BQ9NUM4 274 aa17.68■□□□□ 0.42
SOX17-201ENST00000297316 LYNX1G3V0Z9 82 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 TMPRSS2O15393 492 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 SPINT2O43291 252 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 LYNX1P0DP58 116 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 MUC1P15941 1255 aaPredicted RBP17.67■□□□□ 0.42
SOX17-201ENST00000297316 ADCYAP1P18509 176 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 CAV2P51636 162 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 TMEM204Q9BSN7 226 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 ZNF665Q9H7R5 613 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 CACNG5Q9UF02 275 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 PSG11Q9UQ72 335 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 CHST1O43916 411 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 FCN3O75636 299 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 JTBO76095 146 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 CLDN14O95500 239 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 PAX9P55771 341 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 RNASE11Q8TAA1 199 aaKnown RBP17.67■□□□□ 0.42
SOX17-201ENST00000297316 AGMATQ9BSE5 352 aa17.67■□□□□ 0.42
SOX17-201ENST00000297316 HTD2P86397 168 aa17.66■□□□□ 0.42
SOX17-201ENST00000297316 PUSL1Q8N0Z8 303 aaKnown RBP17.66■□□□□ 0.42
SOX17-201ENST00000297316 UBAC2Q8NBM4 344 aa17.66■□□□□ 0.42
SOX17-201ENST00000297316 ARV1Q9H2C2 271 aa17.66■□□□□ 0.42
SOX17-201ENST00000297316 A0A1B0GU03 582 aa17.66■□□□□ 0.42
SOX17-201ENST00000297316 C19orf84I3L1E1 186 aa17.66■□□□□ 0.42
SOX17-201ENST00000297316 LPAR6P43657 344 aa17.66■□□□□ 0.42
SOX17-201ENST00000297316 SRSF3P84103 164 aaKnown RBP17.66■□□□□ 0.42
SOX17-201ENST00000297316 GUCA2BQ16661 112 aa17.66■□□□□ 0.42
SOX17-201ENST00000297316 CR1LQ2VPA4 569 aa17.66■□□□□ 0.42
SOX17-201ENST00000297316 TRAT1Q6PIZ9 186 aa17.66■□□□□ 0.42
SOX17-201ENST00000297316 TMEM252Q8N6L7 170 aa17.66■□□□□ 0.42
SOX17-201ENST00000297316 LSM10Q969L4 123 aaKnown RBP17.66■□□□□ 0.42
SOX17-201ENST00000297316 LYRM2Q9NU23 88 aaPredicted RBP17.66■□□□□ 0.42
SOX17-201ENST00000297316 PPIAL4EA0A075B759 164 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 ZNF705EA8MWA4 302 aaPredicted RBP17.65■□□□□ 0.42
SOX17-201ENST00000297316 PPIAL4DF5H284 164 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 PPIAL4FP0DN26 164 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 EIF5AP63241 154 aaKnown RBP17.65■□□□□ 0.42
SOX17-201ENST00000297316 TCF23Q7RTU1 214 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 ZBTB34Q8NCN2 500 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 LPAR3Q9UBY5 353 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 PPIAL4AQ9Y536 164 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 C17orf98A8MV24 154 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 PRB1P04280 392 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 SLC25A6P12236 298 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 GZMHP20718 246 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 ZNF816Q0VGE8 651 aaPredicted RBP17.65■□□□□ 0.42
SOX17-201ENST00000297316 Q3ZCU0 254 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 LYPD2Q6UXB3 125 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 SVBPQ8N300 66 aa17.65■□□□□ 0.42
SOX17-201ENST00000297316 LINC00473A8K010 186 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 PROP1O75360 226 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 PVALBP20472 110 aaPredicted RBP17.64■□□□□ 0.41
SOX17-201ENST00000297316 LOXL3P58215 753 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 VAMP2P63027 116 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 C14orf79Q96F83 325 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 TRAV38-1A0A0B4J264 116 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 IGHV1-69-2A0A0G2JMI3 117 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms