RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 LINC00587B1AMM8 73 aa13.47□□□□□ -0.25
SMAD6-201ENST00000288840 IGLV3-1P01715 115 aa13.47□□□□□ -0.25
SMAD6-201ENST00000288840 LYL1P12980 280 aa13.47□□□□□ -0.25
SMAD6-201ENST00000288840 PROCRQ9UNN8 238 aa13.47□□□□□ -0.25
SMAD6-201ENST00000288840 ZNF705FA8MVS1 300 aaPredicted RBP13.46□□□□□ -0.25
SMAD6-201ENST00000288840 C21orf140B9A014 251 aa13.46□□□□□ -0.25
SMAD6-201ENST00000288840 SRP19P09132 144 aaKnown RBP13.46□□□□□ -0.25
SMAD6-201ENST00000288840 ZNF705DP0CH99 300 aaPredicted RBP13.46□□□□□ -0.25
SMAD6-201ENST00000288840 ZNF705BP0CI00 300 aaPredicted RBP13.46□□□□□ -0.25
SMAD6-201ENST00000288840 RTP5Q14D33 572 aa13.46□□□□□ -0.25
SMAD6-201ENST00000288840 LYG1Q8N1E2 194 aa13.46□□□□□ -0.25
SMAD6-201ENST00000288840 H1FXQ92522 213 aaKnown RBP13.46□□□□□ -0.25
SMAD6-201ENST00000288840 IL36GQ9NZH8 169 aa13.46□□□□□ -0.25
SMAD6-201ENST00000288840 DVL1O14640 695 aa13.46□□□□□ -0.25
SMAD6-201ENST00000288840 BCL2P10415 239 aa13.46□□□□□ -0.25
SMAD6-201ENST00000288840 IRF2P14316 349 aa13.46□□□□□ -0.25
SMAD6-201ENST00000288840 TMEM241Q24JQ0 296 aa13.46□□□□□ -0.25
SMAD6-201ENST00000288840 FOXL2NBQ6ZUU3 175 aa13.46□□□□□ -0.25
SMAD6-201ENST00000288840 Q8IYB0 196 aa13.46□□□□□ -0.25
SMAD6-201ENST00000288840 RCC1LQ96I51 464 aaKnown RBP13.46□□□□□ -0.25
SMAD6-201ENST00000288840 M0R296 226 aa13.46□□□□□ -0.26
SMAD6-201ENST00000288840 PGA5P0DJD9 388 aa13.46□□□□□ -0.26
SMAD6-201ENST00000288840 RPP30P78346 268 aaKnown RBP13.46□□□□□ -0.26
SMAD6-201ENST00000288840 FDCSPQ8NFU4 85 aa13.46□□□□□ -0.26
SMAD6-201ENST00000288840 TMEM56Q96MV1 263 aa13.46□□□□□ -0.26
SMAD6-201ENST00000288840 TMEM56-RWDD3S4R434 201 aa13.46□□□□□ -0.26
SMAD6-201ENST00000288840 TRAV38-1A0A0B4J264 116 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 IL18BPO95998 194 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 ACP1P24666 158 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 ID3Q02535 119 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 MOGAT3Q86VF5 341 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 RNF138Q8WVD3 245 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 SARAFQ96BY9 339 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 FGF23Q9GZV9 251 aaPredicted RBP13.45□□□□□ -0.26
SMAD6-201ENST00000288840 C17orf98A8MV24 154 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 C10orf142B7Z368 130 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 C12orf77C9JDV5 145 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 C17orf112F2Z3M2 114 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 RNFT1Q5M7Z0 435 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 Q8WTZ3 238 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 RBM14Q96PK6 669 aaKnown RBP13.45□□□□□ -0.26
SMAD6-201ENST00000288840 S1PR3Q99500 378 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 CLN5O75503 358 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 NAPSAO96009 420 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 ZNRF1Q8ND25 227 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 TAF15Q92804 592 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMAD6-201ENST00000288840 WDYHV1Q96HA8 205 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 RPH3ALQ9UNE2 315 aa13.45□□□□□ -0.26
SMAD6-201ENST00000288840 ZNF320A2RRD8 509 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 PSPNO60542 156 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 BSXQ3C1V8 233 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 R3HDM4Q96D70 268 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 PLSCR2Q9NRY7 297 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 SCGB1D1O95968 90 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 FAM214BQ7L5A3 538 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 MOB1BQ7L9L4 216 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 GATAD1Q8WUU5 269 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 SPRR3Q9UBC9 169 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 ZGRF1Q86YA3 2104 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 FAM3BP58499 235 aaPredicted RBP13.44□□□□□ -0.26
SMAD6-201ENST00000288840 ICAM4Q14773 271 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 KHDC3LQ587J8 217 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 GFI1BQ5VTD9 330 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 ZNF383Q8NA42 475 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 PINX1Q96BK5 328 aaKnown RBP13.44□□□□□ -0.26
SMAD6-201ENST00000288840 ZNF251Q9BRH9 671 aa13.44□□□□□ -0.26
SMAD6-201ENST00000288840 CXCL1P09341 107 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 KITLGP21583 273 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 GALR1P47211 349 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 H1FOOQ8IZA3 346 aaPredicted RBP13.43□□□□□ -0.26
SMAD6-201ENST00000288840 LRTM2Q8N967 370 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 TMEM45BQ96B21 275 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 VAX2Q9UIW0 290 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 IGHV1-2P23083 117 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 ARL16Q0P5N6 197 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 SP9P0CG40 484 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 NMSQ5H8A3 153 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 ZNF324BQ6AW86 544 aaPredicted RBP13.43□□□□□ -0.26
SMAD6-201ENST00000288840 Q6ZPA2 131 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 BCL2L2Q92843 193 aaPredicted RBP13.43□□□□□ -0.26
SMAD6-201ENST00000288840 LINC00470Q9BZP3 86 aa13.43□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A10PA6NDY2 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A18PA6NE21 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A16PA6NEW6 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A20PA6NIJ5 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A8PA6NJQ4 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A7PA6NKC0 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A22PA8MWA6 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A12PA8MX19 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A5PA8MXJ8 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A23PA8MXZ1 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 SMPD2O60906 423 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A15PP0C7V4 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A13PP0C7W8 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A14PP0C7W9 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM90A24PP0C7X0 464 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 CDC34P49427 236 aaPredicted RBP13.42□□□□□ -0.26
SMAD6-201ENST00000288840 TNFRSF9Q07011 255 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 WFDC8Q8IUA0 241 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms