RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 F2RL2O00254 374 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 RAMP3O60896 148 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 CLDN1O95832 211 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 SOD3P08294 240 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 DANCRP0C864 163 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 SLC25A6P12236 298 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 IRF2P14316 349 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 PPOXP50336 477 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 LOXL3P58215 753 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 LINC00205P59089 165 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 EWSR1Q01844 656 aaKnown RBP eCLIP17.33■□□□□ 0.37
YBX3-202ENST00000279550 MSMO1Q15800 293 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 C17orf58Q2M2W7 97 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 TCF23Q7RTU1 214 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 ZNF295-AS1Q8N0V1 137 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 OR2C3Q8N628 320 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 RNASE11Q8TAA1 199 aaKnown RBP17.33■□□□□ 0.37
YBX3-202ENST00000279550 MARVELD3Q96A59 401 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 AGMATQ9BSE5 352 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 CACNG5Q9UF02 275 aa17.33■□□□□ 0.37
YBX3-202ENST00000279550 C17orf98A8MV24 154 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 FGF2P09038 288 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 OMGP23515 440 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 PAX9P55771 341 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 Q3ZCU0 254 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 MORN2Q502X0 79 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 C11orf71Q6IPW1 123 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 DTX2Q86UW9 622 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 NCOR1P1Q9H4R4 102 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 ZNF665Q9H7R5 613 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 GNG12Q9UBI6 72 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 JPT1Q9UK76 154 aa17.33■□□□□ 0.36
YBX3-202ENST00000279550 HRNRQ86YZ3 2850 aaPredicted RBP17.32■□□□□ 0.36
YBX3-202ENST00000279550 ARFGEF3Q5TH69 2177 aa17.32■□□□□ 0.36
YBX3-202ENST00000279550 LGALS8O00214 317 aa17.32■□□□□ 0.36
YBX3-202ENST00000279550 CHST1O43916 411 aa17.32■□□□□ 0.36
YBX3-202ENST00000279550 MUC1P15941 1255 aaPredicted RBP17.32■□□□□ 0.36
YBX3-202ENST00000279550 AKR1C2P52895 323 aa17.32■□□□□ 0.36
YBX3-202ENST00000279550 HSD17B13Q7Z5P4 300 aaPredicted RBP17.32■□□□□ 0.36
YBX3-202ENST00000279550 OR1S2Q8NGQ3 325 aa17.32■□□□□ 0.36
YBX3-202ENST00000279550 ARV1Q9H2C2 271 aa17.32■□□□□ 0.36
YBX3-202ENST00000279550 OR6C3Q9NZP0 311 aa17.32■□□□□ 0.36
YBX3-202ENST00000279550 SIGLEC5O15389 551 aa17.31■□□□□ 0.36
YBX3-202ENST00000279550 IGHV3-7P01780 117 aa17.31■□□□□ 0.36
YBX3-202ENST00000279550 PVALBP20472 110 aaPredicted RBP17.31■□□□□ 0.36
YBX3-202ENST00000279550 CAV2P51636 162 aa17.31■□□□□ 0.36
YBX3-202ENST00000279550 VAMP2P63027 116 aa17.31■□□□□ 0.36
YBX3-202ENST00000279550 EIF5AP63241 154 aaKnown RBP17.31■□□□□ 0.36
YBX3-202ENST00000279550 ZNF816Q0VGE8 651 aaPredicted RBP17.31■□□□□ 0.36
YBX3-202ENST00000279550 TCTEX1D2Q8WW35 142 aa17.31■□□□□ 0.36
YBX3-202ENST00000279550 UBTD1Q9HAC8 227 aa17.31■□□□□ 0.36
YBX3-202ENST00000279550 LYRM2Q9NU23 88 aaPredicted RBP17.31■□□□□ 0.36
YBX3-202ENST00000279550 A1L4Q6 167 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 LINC00473A8K010 186 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 A8MXK9 166 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 PROP1O75360 226 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 JTBO76095 146 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 UBAC2Q8NBM4 344 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 LINC00052Q96N35 136 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 LRBAP50851 2863 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 PIGBOS1A0A0B4J2F0 54 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 LRRC30A6NM36 301 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 SLC31A2O15432 143 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 YPEL1O60688 119 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 FBXO24O75426 580 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 S1PR2O95136 353 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 MMP9P14780 707 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 ZNF134P52741 427 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 SPAG16Q8N0X2 631 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 TMEM252Q8N6L7 170 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 RNF141Q8WVD5 230 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 LEAP2Q969E1 77 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 YPEL2Q96QA6 119 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 FAM234AQ9H0X4 552 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 LAMP3Q9UQV4 416 aa17.3■□□□□ 0.36
YBX3-202ENST00000279550 TMEM178BH3BS89 294 aa17.29■□□□□ 0.36
YBX3-202ENST00000279550 FCN3O75636 299 aa17.29■□□□□ 0.36
YBX3-202ENST00000279550 P0C879 139 aa17.29■□□□□ 0.36
YBX3-202ENST00000279550 CATR1Q13166 79 aa17.29■□□□□ 0.36
YBX3-202ENST00000279550 EIF4E3Q8N5X7 224 aaKnown RBP17.29■□□□□ 0.36
YBX3-202ENST00000279550 DSCAML1Q8TD84 2053 aa17.29■□□□□ 0.36
YBX3-202ENST00000279550 KBTBD11-OT1A0A1B0GTJ5 212 aa17.28■□□□□ 0.36
YBX3-202ENST00000279550 WRBO00258 174 aa17.28■□□□□ 0.36
YBX3-202ENST00000279550 G6PCP35575 357 aa17.28■□□□□ 0.36
YBX3-202ENST00000279550 GPR12P47775 334 aa17.28■□□□□ 0.36
YBX3-202ENST00000279550 ZNF66Q6ZN08 573 aa17.28■□□□□ 0.36
YBX3-202ENST00000279550 EDARADDQ8WWZ3 215 aa17.28■□□□□ 0.36
YBX3-202ENST00000279550 CCL17Q92583 94 aa17.28■□□□□ 0.36
YBX3-202ENST00000279550 IFI27L2Q9H2X8 130 aa17.28■□□□□ 0.36
YBX3-202ENST00000279550 CLN8Q9UBY8 286 aa17.28■□□□□ 0.36
YBX3-202ENST00000279550 MMP24Q9Y5R2 645 aa17.28■□□□□ 0.36
YBX3-202ENST00000279550 IGHV1-69-2A0A0G2JMI3 117 aa17.27■□□□□ 0.36
YBX3-202ENST00000279550 NCR3LG1Q68D85 454 aa17.27■□□□□ 0.36
YBX3-202ENST00000279550 LRRC20Q8TCA0 184 aa17.27■□□□□ 0.36
YBX3-202ENST00000279550 RAB1BQ9H0U4 201 aa17.27■□□□□ 0.36
YBX3-202ENST00000279550 TMEM106BQ9NUM4 274 aa17.27■□□□□ 0.36
YBX3-202ENST00000279550 LPAR3Q9UBY5 353 aa17.27■□□□□ 0.36
YBX3-202ENST00000279550 TANC2Q9HCD6 1990 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 TRGV10A0A0A0MS01 117 aa17.27■□□□□ 0.35
YBX3-202ENST00000279550 BORCS7-ASMTA0A0B4J1R7 106 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms