RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 RECKO95980 971 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 TSPOP30536 169 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 NUBP1P53384 320 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 UCP3P55916 312 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 HSPE1P61604 102 aaKnown RBP7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 C2orf68Q2NKX9 166 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 TM4SF20Q53R12 229 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 SAMD13Q5VXD3 122 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 SAXO1Q8IYX7 474 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 FBLIM1Q8WUP2 373 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 PKIBQ9C010 78 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 LHX9Q9NQ69 397 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 TNFRSF19Q9NS68 423 aa7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 YBX2Q9Y2T7 364 aaKnown RBP7.54□□□□□ -1.2
SCUBE3-201ENST00000274938 TRBV5-7A0A0A0MS05 114 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 A0A1W2PRD5 423 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 A0A1W2PRF3 423 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 A0A1W2PRM7 423 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 C2CD4DB7Z1M9 353 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 C1QL1O75973 258 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 DXOO77932 396 aaKnown RBP7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 PRF1P14222 555 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 RPL31P62899 125 aaKnown RBP7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 TDHQ8IZJ6 230 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 ZCCHC14Q8WYQ9 949 aaKnown RBP7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 LIFP15018 202 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 SRSF12Q8WXF0 261 aaKnown RBP7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 WNT5BQ9H1J7 359 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 MRPL16Q9NX20 251 aaKnown RBP7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 ZNF729A6NN14 1252 aaPredicted RBP7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 C21orf140B9A014 251 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 SAPCD1Q5SSQ6 148 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 HES3Q5TGS1 186 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 WFDC3Q8IUB2 231 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 GEMIN7Q9H840 131 aaKnown RBP7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 SF3B6Q9Y3B4 125 aaKnown RBP7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 SIRT4Q9Y6E7 314 aaPredicted RBP7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 NRXN3Q9Y4C0 1643 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 SLC17A3O00476 420 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 ATP5LO75964 103 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 GHRHP01286 108 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 RRN3P1Q2M238 152 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 FAM219BQ5XKK7 198 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 FAM181AQ8N9Y4 354 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 DDB2Q92466 427 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 LINC00470Q9BZP3 86 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 MFAP4P55083 255 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 GFRA1P56159 465 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 PRSS12P56730 875 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 RTP5Q14D33 572 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 KLK10O43240 276 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 CD8AP01732 235 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 IFI6P09912 130 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 ASAH2BP0C7U1 165 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 HOXB3P14651 431 aaPredicted RBP7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 GCSAMLQ5JQS6 135 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 NUP37Q8NFH4 326 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 OR51G1Q8NGK1 321 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 CT55Q8WUE5 264 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 WDYHV1Q96HA8 205 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 RAX2Q96IS3 184 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 CRISPLD2Q9H0B8 497 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 SPCS1Q9Y6A9 102 aa7.53□□□□□ -1.2
SCUBE3-201ENST00000274938 OTX1P32242 354 aaPredicted RBP7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 TNFRSF9Q07011 255 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 KLHDC2Q9Y2U9 406 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 A0A087WWC5 75 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 TYMSP04818 313 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 ARL14EPLP0DKL9 152 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 MYF5P13349 255 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 SOX8P57073 446 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 MAJINQ3KP22 176 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 ZNF658BQ4V348 819 aaPredicted RBP7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 POC1AQ8NBT0 407 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 WDR54Q9H977 334 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 RND2P52198 227 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 BHLHA9Q7RTU4 235 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 FGFRL1Q8N441 504 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 R3HDMLQ9H3Y0 253 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 SMOC1Q9H4F8 434 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 RGPD2P0DJD1 1756 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 TRAV39A0A0B4J263 110 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 GDF9O60383 454 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 FXYD3Q14802 87 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 CXorf66Q5JRM2 361 aaPredicted RBP7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 GATAD1Q8WUU5 269 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 C11orf68Q9H3H3 251 aaKnown RBP7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 IGKV3-7A0A075B6H7 116 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 FAM106CPP0CH98 169 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 MDP1Q86V88 176 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 SLC25A38Q96DW6 304 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 C5orf30Q96GV9 206 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 GSN-AS1Q9NRJ2 163 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 SERGEFQ9UGK8 458 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 RNASE1P07998 156 aaKnown RBP7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 CRYBB3P26998 211 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 SSTR5P35346 364 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 MPV17P39210 176 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 LIMS1P48059 325 aa7.52□□□□□ -1.21
SCUBE3-201ENST00000274938 C10orf128Q5T292 105 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms