RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 FAM78AQ5JUQ0 283 aa13.84□□□□□ -0.19
UBR3-201ENST00000272793 ZNF793Q6ZN11 406 aa13.84□□□□□ -0.19
UBR3-201ENST00000272793 HCSTQ9UBK5 93 aa13.84□□□□□ -0.19
UBR3-201ENST00000272793 IGF2P01344 180 aa13.84□□□□□ -0.19
UBR3-201ENST00000272793 SELENOPP49908 381 aa13.84□□□□□ -0.19
UBR3-201ENST00000272793 ZNF774Q6NX45 483 aa13.84□□□□□ -0.19
UBR3-201ENST00000272793 C1orf122Q6ZSJ8 110 aa13.84□□□□□ -0.19
UBR3-201ENST00000272793 KIAA1644Q3SXP7 199 aa13.84□□□□□ -0.19
UBR3-201ENST00000272793 MGST2Q99735 147 aa13.84□□□□□ -0.19
UBR3-201ENST00000272793 SRIP30626 198 aa13.83□□□□□ -0.19
UBR3-201ENST00000272793 C16orf52Q8NHV5 167 aa13.83□□□□□ -0.19
UBR3-201ENST00000272793 NRIP2Q9BQI9 281 aa13.83□□□□□ -0.19
UBR3-201ENST00000272793 C5orf47Q569G3 176 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 GOLT1AQ6ZVE7 132 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 ARRDC1-AS1Q9H2J1 176 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 INS-IGF2F8WCM5 200 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 INSP01308 110 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 ADAMTSL4Q6UY14 1074 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 CYB561D1Q8N8Q1 229 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 STARD10Q9Y365 291 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 PLXND1Q9Y4D7 1925 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 SPATA31D1Q6ZQQ2 1576 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 SIGLEC5O15389 551 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 SIGLEC14Q08ET2 396 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 KCNS1Q96KK3 526 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 TSPOP30536 169 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 ST6GALNAC6Q969X2 333 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 SCGB3A1Q96QR1 104 aa13.83□□□□□ -0.2
UBR3-201ENST00000272793 H0YIG0 161 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 CTSVO60911 334 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 RNF182Q8N6D2 247 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 FAM106CPP0CH98 169 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 IL11RAQ14626 422 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 CENPVQ7Z7K6 275 aaPredicted RBP13.82□□□□□ -0.2
UBR3-201ENST00000272793 SLC25A37Q9NYZ2 338 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 SLC45A1Q9Y2W3 748 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 DDX60Q8IY21 1712 aaKnown RBP13.82□□□□□ -0.2
UBR3-201ENST00000272793 TNFRSF6BO95407 300 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 CTLA4P16410 223 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 NPC2P61916 151 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 B9D1Q9UPM9 204 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 SLIT3O75094 1523 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 EPPINO95925 133 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 SYT11Q9BT88 431 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 PCDH15Q96QU1 1955 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 ATP5LO75964 103 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 OCIAD2Q56VL3 154 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 PATE1Q8WXA2 126 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 PRB4P10163 310 aaPredicted RBP13.82□□□□□ -0.2
UBR3-201ENST00000272793 WIPI1Q5MNZ9 446 aaPredicted RBP13.82□□□□□ -0.2
UBR3-201ENST00000272793 CLEC2AQ6UVW9 174 aa13.82□□□□□ -0.2
UBR3-201ENST00000272793 TRPM7Q96QT4 1865 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 FOCADQ5VW36 1801 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 VWC2LB2RUY7 222 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 ACSF3Q4G176 576 aaPredicted RBP13.81□□□□□ -0.2
UBR3-201ENST00000272793 DPRXA6NFQ7 191 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 PROB1E7EW31 1015 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 PEX7O00628 323 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 THY1P04216 161 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 DUX3Q96PT4 197 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 SDHCQ99643 169 aaPredicted RBP13.81□□□□□ -0.2
UBR3-201ENST00000272793 MTCH2Q9Y6C9 303 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 PXMP4Q9Y6I8 212 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 RBMY1FQ15415 496 aaKnown RBP13.81□□□□□ -0.2
UBR3-201ENST00000272793 PSG2P11465 335 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 NUTF2P61970 127 aaKnown RBP13.81□□□□□ -0.2
UBR3-201ENST00000272793 HMSDA8MTL9 139 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 ZNF250P15622 560 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 SRD5A2P31213 254 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 CLDN10P78369 228 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 LINC00299Q6ZSB3 139 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 PTOV1Q86YD1 416 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 C10orf111Q8N326 155 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 A0A087WUJ7 227 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 M0R381 172 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 HLA-DQA1P01909 254 aa13.81□□□□□ -0.2
UBR3-201ENST00000272793 RPS20P60866 119 aaKnown RBP13.81□□□□□ -0.2
UBR3-201ENST00000272793 CCDC144NLQ6NUI1 221 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 SLC6A13Q9NSD5 602 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 ANKRD20A5PA0PJZ0 165 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 GAGE2BQ13066 116 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 GAPTQ8N292 157 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 PDXPQ96GD0 296 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 EP300Q09472 2414 aaPredicted RBP13.8□□□□□ -0.2
UBR3-201ENST00000272793 SYNGR1O43759 233 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 METRNLQ641Q3 311 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 ITLN2Q8WWU7 325 aaPredicted RBP13.8□□□□□ -0.2
UBR3-201ENST00000272793 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 CTXND1A0A1B0GTU2 59 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 PDCD6O75340 191 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 CTAG2O75638 210 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 TOMM40O96008 361 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 DEFB103AP81534 67 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 MESTQ5EB52 335 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 MS4A6EQ96DS6 147 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 HEXA-AS1Q9H8Q6 139 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 KBTBD11-OT1A0A1B0GTJ5 212 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 KLF4O43474 513 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 LCN2P80188 198 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 PABPC1L2AQ5JQF8 200 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms