RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 DUX4L2P0CJ85 424 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 DUX4L3P0CJ86 424 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 DUX4L4P0CJ87 422 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 DUX4L5P0CJ88 424 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 DUX4L6P0CJ89 424 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 DUX4L7P0CJ90 424 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 SLC25A4P12235 298 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 MSMO1Q15800 293 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 TMEM65Q6PI78 240 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 DUX4L9Q6RFH8 374 aaPredicted RBP20.2■□□□□ 0.82
SSBP4-201ENST00000270061 TMEM56Q96MV1 263 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 SLA2Q9H6Q3 261 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 OR2S2Q9NQN1 319 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 DUX4Q9UBX2 424 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 TMEM56-RWDD3S4R434 201 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 RGS13O14921 159 aa20.19■□□□□ 0.82
SSBP4-201ENST00000270061 LCN2P80188 198 aa20.19■□□□□ 0.82
SSBP4-201ENST00000270061 IL15RAQ13261 267 aa20.19■□□□□ 0.82
SSBP4-201ENST00000270061 FAM216BQ8N7L0 139 aa20.19■□□□□ 0.82
SSBP4-201ENST00000270061 ZBTB34Q8NCN2 500 aa20.19■□□□□ 0.82
SSBP4-201ENST00000270061 CORO2AQ92828 525 aa20.19■□□□□ 0.82
SSBP4-201ENST00000270061 OR10C1Q96KK4 312 aa20.19■□□□□ 0.82
SSBP4-201ENST00000270061 PARP12Q9H0J9 701 aaKnown RBP20.19■□□□□ 0.82
SSBP4-201ENST00000270061 RBM7Q9Y580 266 aaKnown RBP20.19■□□□□ 0.82
SSBP4-201ENST00000270061 NDUFA2O43678 99 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 FOXH1O75593 365 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 OR8U9P0C7N5 309 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 C11orf87Q6NUJ2 197 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 OR8U1Q8NH10 309 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 KAAG1Q9UBP8 84 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 JPT1Q9UK76 154 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 MPTX1A8MV57 137 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 H0Y980 276 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 TMPRSS2O15393 492 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 F2RP25116 425 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 UCP1P25874 307 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 PSMB6P28072 239 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 GGNBP1Q5YKI7 109 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 LINC00574Q9H8X3 128 aa20.18■□□□□ 0.82
SSBP4-201ENST00000270061 UBE2J1Q9Y385 318 aaPredicted RBP20.18■□□□□ 0.82
SSBP4-201ENST00000270061 GATA3P23771 443 aa20.17■□□□□ 0.82
SSBP4-201ENST00000270061 GNMTQ14749 295 aa20.17■□□□□ 0.82
SSBP4-201ENST00000270061 ZNF645Q8N7E2 425 aa20.17■□□□□ 0.82
SSBP4-201ENST00000270061 RFESDQ8TAC1 157 aa20.17■□□□□ 0.82
SSBP4-201ENST00000270061 CALYQ9NYX4 217 aa20.17■□□□□ 0.82
SSBP4-201ENST00000270061 FXYD6-FXYD2A0A087WZ82 144 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 TRGV10A0A0A0MS01 117 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 PIGBOS1A0A0B4J2F0 54 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 MPC2O95563 127 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 CDS2O95674 445 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 ZFP36P26651 326 aaKnown RBP20.16■□□□□ 0.82
SSBP4-201ENST00000270061 TEX29Q8N6K0 151 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 LHFPL5Q8TAF8 219 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 IL22RA2Q969J5 263 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 TMED3Q9Y3Q3 217 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 DUXBA0A1W2PPF3 345 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 F5H0A9 414 aaPredicted RBP20.16■□□□□ 0.82
SSBP4-201ENST00000270061 J3QLI3 93 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 YPEL1O60688 119 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 RPA2P15927 270 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 CXCL2P19875 107 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 C4BPBP20851 252 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 PPP1CCP36873 323 aaKnown RBP20.16■□□□□ 0.82
SSBP4-201ENST00000270061 C17orf58Q2M2W7 97 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 ESCO2Q56NI9 601 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 YPEL2Q96QA6 119 aa20.16■□□□□ 0.82
SSBP4-201ENST00000270061 SLC25A10Q9UBX3 287 aaPredicted RBP20.16■□□□□ 0.82
SSBP4-201ENST00000270061 DSCAML1Q8TD84 2053 aa20.15■□□□□ 0.82
SSBP4-201ENST00000270061 PPIAL4CA0A0B4J2A2 164 aa20.15■□□□□ 0.82
SSBP4-201ENST00000270061 KBTBD11-OT1A0A1B0GTJ5 212 aa20.15■□□□□ 0.82
SSBP4-201ENST00000270061 RNF212BA8MTL3 300 aa20.15■□□□□ 0.82
SSBP4-201ENST00000270061 LOXL3P58215 753 aa20.15■□□□□ 0.82
SSBP4-201ENST00000270061 MEF2CQ06413 473 aaPredicted RBP20.15■□□□□ 0.82
SSBP4-201ENST00000270061 LYZL2Q7Z4W2 148 aa20.15■□□□□ 0.82
SSBP4-201ENST00000270061 DRAM1Q8N682 238 aa20.15■□□□□ 0.82
SSBP4-201ENST00000270061 EDARADDQ8WWZ3 215 aa20.15■□□□□ 0.82
SSBP4-201ENST00000270061 TMEM158Q8WZ71 300 aa20.15■□□□□ 0.82
SSBP4-201ENST00000270061 CLN8Q9UBY8 286 aa20.15■□□□□ 0.82
SSBP4-201ENST00000270061 STAB1Q9NY15 2570 aa20.14■□□□□ 0.81
SSBP4-201ENST00000270061 ZNF729A6NN14 1252 aaPredicted RBP20.14■□□□□ 0.81
SSBP4-201ENST00000270061 AVPP01185 164 aa20.14■□□□□ 0.81
SSBP4-201ENST00000270061 IAH1Q2TAA2 248 aaPredicted RBP20.14■□□□□ 0.81
SSBP4-201ENST00000270061 TMEM30BQ3MIR4 351 aa20.14■□□□□ 0.81
SSBP4-201ENST00000270061 MORN2Q502X0 79 aa20.14■□□□□ 0.81
SSBP4-201ENST00000270061 C1orf229Q6ZS94 237 aaPredicted RBP20.14■□□□□ 0.81
SSBP4-201ENST00000270061 TCF23Q7RTU1 214 aa20.14■□□□□ 0.81
SSBP4-201ENST00000270061 ZNF546Q86UE3 836 aa20.14■□□□□ 0.81
SSBP4-201ENST00000270061 THAP6Q8TBB0 222 aa20.14■□□□□ 0.81
SSBP4-201ENST00000270061 MIOXQ9UGB7 285 aa20.14■□□□□ 0.81
SSBP4-201ENST00000270061 LOC105371242A0A075B767 164 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 hADV38S2A0JD32 116 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 L7N2F9 121 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 ITGB1BP1O14713 200 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 ARPC5O15511 151 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 TNFSF12O43508 249 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 SCGB2A2Q13296 93 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 LRRC37A5PQ49AS3 106 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 TMEM268Q5VZI3 342 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 SELENOHQ8IZQ5 122 aaKnown RBP20.13■□□□□ 0.81
SSBP4-201ENST00000270061 GPHA2Q96T91 129 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms