RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 C1orf210Q8IVY1 113 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 DNASE2BQ8WZ79 361 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 SPRY3O43610 288 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 ZIC3O60481 467 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 NPIPB7O75200 414 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 CD99P14209 185 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 HES1Q14469 280 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 DEFB109BQ30KR1 87 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 PAQR4Q8N4S7 273 aaPredicted RBP9.93□□□□□ -0.82
VPS33A-201ENST00000267199 ST6GALNAC3Q8NDV1 305 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 PRSS3P2Q8NHM4 247 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 TUBA4BQ9H853 241 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 CISD1Q9NZ45 108 aaKnown RBP9.93□□□□□ -0.82
VPS33A-201ENST00000267199 IGHV1-45A0A0A0MS14 117 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 H0Y980 276 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 J3QT63 122 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 MFAP2P55001 183 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 PYY3Q5JQD4 70 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 DMRTA2Q96SC8 542 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 TIMP4Q99727 224 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 CYTL1Q9NRR1 136 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 DECR2Q9NUI1 292 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 LRRC30A6NM36 301 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 CHRNB4P30926 498 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 SPCS3P61009 180 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 AESQ08117 197 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 ASPHD2Q6ICH7 369 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 NUDT16L1Q9BRJ7 211 aaKnown RBP9.93□□□□□ -0.82
VPS33A-201ENST00000267199 GSX1Q9H4S2 264 aaPredicted RBP9.93□□□□□ -0.82
VPS33A-201ENST00000267199 KIAA2026Q5HYC2 2103 aa9.93□□□□□ -0.82
VPS33A-201ENST00000267199 WNK2Q9Y3S1 2297 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 J3QR89 54 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 ORM2P19652 201 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 ZNF137PP52743 207 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 RTN4RL2Q86UN3 420 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 FBLL1A6NHQ2 334 aaKnown RBP9.92□□□□□ -0.82
VPS33A-201ENST00000267199 SYNGR1O43759 233 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 CD5P06127 495 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 CBLN1P23435 193 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 OTX1P32242 354 aaPredicted RBP9.92□□□□□ -0.82
VPS33A-201ENST00000267199 PMS2CLQ68D20 193 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 VWA1Q6PCB0 445 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 ZNF738Q8NE65 137 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 OR2M7Q8NG81 312 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 GALNT14Q96FL9 552 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 CACNA1HO95180 2353 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 KBTBD11O94819 623 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 CD1BP29016 333 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 PAFAH1B2P68402 229 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 PCOLCEQ15113 449 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 ABLIM2Q6H8Q1 611 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 SLC23A3Q6PIS1 610 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 P2RX4Q99571 388 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 MRPL18Q9H0U6 180 aaKnown RBP9.92□□□□□ -0.82
VPS33A-201ENST00000267199 FOXJ2Q9P0K8 574 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 RFNGQ9Y644 331 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 SPTAN1Q13813 2472 aaKnown RBP9.92□□□□□ -0.82
VPS33A-201ENST00000267199 SHISA7A6NL88 538 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 CXCL1P09341 107 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 FGF5P12034 268 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 CDCP2Q5VXM1 449 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 FGFRL1Q8N441 504 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 OR1L4Q8NGR5 311 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 LRRC29Q8WV35 223 aa9.92□□□□□ -0.82
VPS33A-201ENST00000267199 IGKV1D-8A0A087WSZ0 117 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 IGLV3-19P01714 112 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 SRP14P37108 136 aaKnown RBP9.91□□□□□ -0.82
VPS33A-201ENST00000267199 FXYD3Q14802 87 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 ARSJQ5FYB0 599 aaPredicted RBP9.91□□□□□ -0.82
VPS33A-201ENST00000267199 HEPN1Q6WQI6 88 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 OR4X1Q8NH49 305 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 SAP25Q8TEE9 199 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 ABHD14BQ96IU4 210 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 TMEM191AQ9H0A3 160 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 NGBQ9NPG2 151 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 NDUFA2O43678 99 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 ZNF83P51522 516 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 ARL16Q0P5N6 197 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 TMEM251Q8N6I4 163 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 IMMP2LQ96T52 175 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 SRXN1Q9BYN0 137 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 BARX1Q9HBU1 254 aaPredicted RBP9.91□□□□□ -0.82
VPS33A-201ENST00000267199 TRGV10A0A0A0MS01 117 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 TRAV17A0A0B4J275 112 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 HAND1O96004 215 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 APCSP02743 223 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 FGF12P61328 243 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 DMWDQ09019 674 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 IGFBP7Q16270 282 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 COL4A6Q14031 1691 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 SHANK1Q9Y566 2161 aa9.91□□□□□ -0.82
VPS33A-201ENST00000267199 NEURL1O76050 574 aa9.9□□□□□ -0.82
VPS33A-201ENST00000267199 CXorf1O96002 111 aa9.9□□□□□ -0.82
VPS33A-201ENST00000267199 MIC13Q5XKP0 118 aa9.9□□□□□ -0.82
VPS33A-201ENST00000267199 RNF2Q99496 336 aa9.9□□□□□ -0.82
VPS33A-201ENST00000267199 EGLN1Q9GZT9 426 aa9.9□□□□□ -0.82
VPS33A-201ENST00000267199 RNF122Q9H9V4 155 aa9.9□□□□□ -0.82
VPS33A-201ENST00000267199 WFDC1Q9HC57 220 aa9.9□□□□□ -0.82
VPS33A-201ENST00000267199 ATP23Q9Y6H3 246 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms