RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 PRSS46E5RG02 174 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 WRBO00258 174 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 MGST3O14880 152 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 GPR37O15354 613 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 S1PR2O95136 353 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 PRH1P02810 166 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 DUTP33316 252 aaKnown RBP9.27□□□□□ -0.93
MSH3-201ENST00000265081 SSTR5P35346 364 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 TMEM249Q2WGJ8 235 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 TMEM41BQ5BJD5 291 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 OTOGLQ3ZCN5 2332 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 CRYABP02511 175 aaKnown RBP9.26□□□□□ -0.93
MSH3-201ENST00000265081 MT-ND4LP03901 98 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 GZMHP20718 246 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 ZNF561Q8N587 486 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 CD300LFQ8TDQ1 290 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 MRGPRDQ8TDS7 321 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 P2RX4Q99571 388 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 EIF5A2Q9GZV4 153 aaKnown RBP9.26□□□□□ -0.93
MSH3-201ENST00000265081 KCNS2Q9ULS6 477 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 IL6RP08887 468 aaPredicted RBP9.26□□□□□ -0.93
MSH3-201ENST00000265081 TEX36Q5VZQ5 186 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 STUMQ69YW2 141 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 LINC00518Q8N0U6 118 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 TMEM217Q8N7C4 229 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 ZNF439Q8NDP4 499 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 CORO2AQ92828 525 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 PINX1Q96BK5 328 aaKnown RBP9.26□□□□□ -0.93
MSH3-201ENST00000265081 IFI27L2Q9H2X8 130 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 UNKLQ9H9P5 680 aaKnown RBP9.26□□□□□ -0.93
MSH3-201ENST00000265081 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.26□□□□□ -0.93
MSH3-201ENST00000265081 CD55P08174 381 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 CCKARP32238 428 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 TMPRSS3P57727 454 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 C17orf58Q2M2W7 97 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 RPRMLQ8N4K4 120 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.26□□□□□ -0.93
MSH3-201ENST00000265081 ZNF835Q9Y2P0 537 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 NXPH3O95157 252 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 IFNA5P01569 189 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 TFF1P04155 84 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 IL2RGP31785 369 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 TMEM30BQ3MIR4 351 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 AKR1C8PQ5T2L2 129 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 TCF23Q7RTU1 214 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 SLC35E3Q7Z769 313 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 PRR18Q8N4B5 295 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 TAF15Q92804 592 aaKnown RBP eCLIP9.26□□□□□ -0.93
MSH3-201ENST00000265081 C14orf79Q96F83 325 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 RPRMQ9NS64 109 aa9.26□□□□□ -0.93
MSH3-201ENST00000265081 FABP6P51161 128 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 HAGHQ16775 308 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 FAM90A2PQ658T7 463 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 VSIRQ9H7M9 311 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 IL19Q9UHD0 177 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 FZR1Q9UM11 496 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 FBXO7Q9Y3I1 522 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 A8MXE2 369 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 K7EM74 188 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 RPS23P62266 143 aaKnown RBP9.25□□□□□ -0.93
MSH3-201ENST00000265081 EDARADDQ8WWZ3 215 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 FAM234AQ9H0X4 552 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 AHCTF1Q8WYP5 2266 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 CXorf65A6NEN9 183 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 SPINT2O43291 252 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 G6PCP35575 357 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 THNSL2Q86YJ6 484 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 MUCL1Q96DR8 90 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 CIB3Q96Q77 187 aaPredicted RBP9.25□□□□□ -0.93
MSH3-201ENST00000265081 TMEM242Q9NWH2 141 aa9.25□□□□□ -0.93
MSH3-201ENST00000265081 METTL15P1P0C7V9 234 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 IAPPP10997 89 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 GABRA2P47869 451 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 KLF3P57682 345 aaPredicted RBP9.24□□□□□ -0.93
MSH3-201ENST00000265081 OR2Z1Q8NG97 314 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 CA5BP1Q8WTZ4 195 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 RCC1LQ96I51 464 aaKnown RBP9.24□□□□□ -0.93
MSH3-201ENST00000265081 RSG1Q9BU20 258 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 ESRP2Q9H6T0 727 aaKnown RBP9.24□□□□□ -0.93
MSH3-201ENST00000265081 CLDN1O95832 211 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 KIR2DS2P43631 304 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 SLC38A11Q08AI6 406 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 UBALD1Q8TB05 177 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 OR2V2Q96R30 315 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 TRGV8A0A0C4DH27 118 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 C5orf52A6NGY3 159 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 HPRT1P00492 218 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 ZNF16P17020 682 aaPredicted RBP9.24□□□□□ -0.93
MSH3-201ENST00000265081 PTAFRP25105 342 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 ZNF134P52741 427 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 POU2AF1Q16633 256 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 C1orf229Q6ZS94 237 aaPredicted RBP9.24□□□□□ -0.93
MSH3-201ENST00000265081 C22orf34Q6ZV56 151 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 SSX8Q7RTT4 187 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 MRGPRGQ86SM5 289 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 NINJ1Q92982 152 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 ZNF251Q9BRH9 671 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 TMEM147Q9BVK8 224 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 ZNF292O60281 2723 aa9.24□□□□□ -0.93
MSH3-201ENST00000265081 MED19A0JLT2 244 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms