RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 TNRC6BQ9UPQ9 1833 aaKnown RBP14.71□□□□□ -0.05
TRAM1-201ENST00000262213 MKRN2OSH3BPM6 223 aa14.71□□□□□ -0.05
TRAM1-201ENST00000262213 EREGO14944 169 aa14.71□□□□□ -0.05
TRAM1-201ENST00000262213 SYNGR4O95473 234 aa14.71□□□□□ -0.05
TRAM1-201ENST00000262213 IL18BPO95998 194 aa14.71□□□□□ -0.05
TRAM1-201ENST00000262213 LINC00205P59089 165 aa14.71□□□□□ -0.05
TRAM1-201ENST00000262213 TMEM14EPQ6UXP3 125 aa14.71□□□□□ -0.05
TRAM1-201ENST00000262213 THOC3Q96J01 351 aaKnown RBP14.71□□□□□ -0.05
TRAM1-201ENST00000262213 OR2D2Q9H210 308 aa14.71□□□□□ -0.05
TRAM1-201ENST00000262213 MT-CO3P00414 261 aa14.71□□□□□ -0.06
TRAM1-201ENST00000262213 RPL30P62888 115 aaKnown RBP14.71□□□□□ -0.06
TRAM1-201ENST00000262213 LINC00596Q86U02 117 aa14.71□□□□□ -0.06
TRAM1-201ENST00000262213 LRP11Q86VZ4 500 aa14.71□□□□□ -0.06
TRAM1-201ENST00000262213 OR1L1Q8NH94 360 aa14.71□□□□□ -0.06
TRAM1-201ENST00000262213 RNASEH2CQ8TDP1 164 aaKnown RBP14.71□□□□□ -0.06
TRAM1-201ENST00000262213 TMEM170AQ8WVE7 144 aa14.71□□□□□ -0.06
TRAM1-201ENST00000262213 ACTR3CQ9C0K3 210 aaPredicted RBP14.71□□□□□ -0.06
TRAM1-201ENST00000262213 PGPEP1LA6NFU8 196 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 TFF1P04155 84 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 NUFIP2Q7Z417 695 aaKnown RBP14.7□□□□□ -0.06
TRAM1-201ENST00000262213 PIGBOS1A0A0B4J2F0 54 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 LRP5LA4QPB2 252 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 OR5B21A6NL26 309 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 CDIPTO14735 213 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 NXPH2O95156 264 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 SCGB1D1O95968 90 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 MPLP40238 635 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 MAGEA5P43359 124 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 CST9LP1Q5W188 147 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 ZNF709Q8N972 641 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 NDUFAF3Q9BU61 184 aa14.7□□□□□ -0.06
TRAM1-201ENST00000262213 A0A0U1RQK1 487 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 ODAMA1E959 279 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 TMEM250H0YL14 139 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 S1PR2O95136 353 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 GRPP07492 148 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 HNF1AP20823 631 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 HOXA6P31267 233 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 LHX2P50458 406 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 GCSAMLQ5JQS6 135 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 ZNF497Q6ZNH5 498 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 WDR86Q86TI4 376 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 TGIF2LYQ8IUE0 185 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 OR10P1Q8NGE3 313 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 OR52L2PQ8NGH6 319 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 TMEM18Q96B42 140 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 NEIL1Q96FI4 390 aaPredicted RBP14.69□□□□□ -0.06
TRAM1-201ENST00000262213 C2orf88Q9BSF0 95 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 TMEM147Q9BVK8 224 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 BOKQ9UMX3 212 aaPredicted RBP14.69□□□□□ -0.06
TRAM1-201ENST00000262213 COLQQ9Y215 455 aaPredicted RBP14.69□□□□□ -0.06
TRAM1-201ENST00000262213 MPC1Q9Y5U8 109 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 PRRC2CQ9Y520 2896 aaKnown RBP14.69□□□□□ -0.06
TRAM1-201ENST00000262213 C11orf94C9JXX5 98 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 J3QT63 122 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 NPPCP23582 126 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 OR3A1P47881 315 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 NRN1LQ496H8 165 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 TMPRSS7Q7RTY8 843 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 CXorf67Q86X51 503 aaPredicted RBP14.69□□□□□ -0.06
TRAM1-201ENST00000262213 SCCPDHQ8NBX0 429 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 NOL4LQ96MY1 436 aaPredicted RBP14.69□□□□□ -0.06
TRAM1-201ENST00000262213 TMEM204Q9BSN7 226 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 DERL1Q9BUN8 251 aa14.69□□□□□ -0.06
TRAM1-201ENST00000262213 ZNF320A2RRD8 509 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 TCAPO15273 167 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 FOSL1P15407 271 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 ARR3P36575 388 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 PAX5Q02548 391 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 SLC10A1Q14973 349 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 ACSF3Q4G176 576 aaPredicted RBP14.68□□□□□ -0.06
TRAM1-201ENST00000262213 ACTL10Q5JWF8 245 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 LINC00470Q9BZP3 86 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 OR6C3Q9NZP0 311 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 IGKV3D-15A0A087WSY6 115 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 SS18L1O75177 396 aaPredicted RBP14.68□□□□□ -0.06
TRAM1-201ENST00000262213 GCGP01275 180 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 COX5AP20674 150 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 CLDN18P56856 261 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 MCEMP1Q8IX19 187 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 DTD1Q8TEA8 209 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 SDSLQ96GA7 329 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 NPCDR1Q9BY65 106 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 CBLN4Q9NTU7 201 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 TRAV38-1A0A0B4J264 116 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 C17orf98A8MV24 154 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 B4E171 279 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 PAX1P15863 534 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 G0S2P27469 103 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 TSPAN7P41732 249 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 ALKBH6Q3KRA9 238 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 ACY3Q96HD9 319 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 STRADBQ9C0K7 418 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 PILRBQ9UKJ0 227 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 TIMM9Q9Y5J7 89 aa14.68□□□□□ -0.06
TRAM1-201ENST00000262213 TRIOBPQ9H2D6 2365 aa14.67□□□□□ -0.06
TRAM1-201ENST00000262213 SOX15O60248 233 aa14.67□□□□□ -0.06
TRAM1-201ENST00000262213 PDGFBP01127 241 aaPredicted RBP14.67□□□□□ -0.06
TRAM1-201ENST00000262213 ATP5G3P48201 142 aa14.67□□□□□ -0.06
TRAM1-201ENST00000262213 MSMO1Q15800 293 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms