RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 RBKSQ9H477 322 aa13□□□□□ -0.33
RIPK1-201ENST00000259808 CLDN16Q9Y5I7 305 aa13□□□□□ -0.33
RIPK1-201ENST00000259808 CHD7Q9P2D1 2997 aa13□□□□□ -0.33
RIPK1-201ENST00000259808 CHEK1O14757 476 aa13□□□□□ -0.33
RIPK1-201ENST00000259808 IGHMP01871 453 aa13□□□□□ -0.33
RIPK1-201ENST00000259808 DANCRP0C864 163 aa13□□□□□ -0.33
RIPK1-201ENST00000259808 IER3P46695 156 aa13□□□□□ -0.33
RIPK1-201ENST00000259808 CCL20P78556 96 aa13□□□□□ -0.33
RIPK1-201ENST00000259808 RTP5Q14D33 572 aa13□□□□□ -0.33
RIPK1-201ENST00000259808 CCL13Q99616 98 aa13□□□□□ -0.33
RIPK1-201ENST00000259808 FAM90A27PA6NNH2 459 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 MKRN2OSH3BPM6 223 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 S1PR2O95136 353 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 CELA3BP08861 270 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 GNG4P50150 75 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 SUB1P53999 127 aaKnown RBP eCLIP12.99□□□□□ -0.33
RIPK1-201ENST00000259808 RBPJQ06330 500 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 MRGPRGQ86SM5 289 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 PAM16Q9Y3D7 125 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 SUMO1P63165 101 aaKnown RBP12.99□□□□□ -0.33
RIPK1-201ENST00000259808 MIC13Q5XKP0 118 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 ZDHHC16Q969W1 377 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 IGKV1-12A0A0C4DH73 117 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 PITX3O75364 302 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 IGKV1D-12P01611 117 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 CLPSP04118 112 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 IFI6P09912 130 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 PRB4P10163 310 aaPredicted RBP12.99□□□□□ -0.33
RIPK1-201ENST00000259808 STARD6P59095 220 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 SCGB2A2Q13296 93 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 RNASEKQ6P5S7 137 aaKnown RBP12.99□□□□□ -0.33
RIPK1-201ENST00000259808 ZNRF1Q8ND25 227 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 DEPPQ9NTK1 212 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 OOEPA6NGQ2 149 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 H3BTX0 84 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 SLC31A2O15432 143 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 TGOLN2O43493 480 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 PRDX2P32119 198 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 SUPT4H1P63272 117 aaKnown RBP12.99□□□□□ -0.33
RIPK1-201ENST00000259808 RAB24Q969Q5 203 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 MARVELD3Q96A59 401 aa12.99□□□□□ -0.33
RIPK1-201ENST00000259808 F8VVB4 439 aa12.98□□□□□ -0.33
RIPK1-201ENST00000259808 F8VWA3 439 aa12.98□□□□□ -0.33
RIPK1-201ENST00000259808 HRASP01112 189 aa12.98□□□□□ -0.33
RIPK1-201ENST00000259808 UBE2L3P68036 154 aaKnown RBP12.98□□□□□ -0.33
RIPK1-201ENST00000259808 KIAA1644Q3SXP7 199 aa12.98□□□□□ -0.33
RIPK1-201ENST00000259808 DPPA3Q6W0C5 159 aa12.98□□□□□ -0.33
RIPK1-201ENST00000259808 NHLRC2Q8NBF2 726 aa12.98□□□□□ -0.33
RIPK1-201ENST00000259808 BOD1Q96IK1 185 aa12.98□□□□□ -0.33
RIPK1-201ENST00000259808 SYNGR3O43761 229 aa12.98□□□□□ -0.33
RIPK1-201ENST00000259808 PRB3Q04118 309 aaPredicted RBP12.98□□□□□ -0.33
RIPK1-201ENST00000259808 OR10G8Q8NGN5 311 aa12.98□□□□□ -0.33
RIPK1-201ENST00000259808 LYRM2Q9NU23 88 aaPredicted RBP12.98□□□□□ -0.33
RIPK1-201ENST00000259808 SLC25A5P05141 298 aaKnown RBP12.98□□□□□ -0.33
RIPK1-201ENST00000259808 DHRS7BQ6IAN0 325 aaPredicted RBP12.98□□□□□ -0.33
RIPK1-201ENST00000259808 TUBD1Q9UJT1 453 aa12.98□□□□□ -0.33
RIPK1-201ENST00000259808 hCG_38984A0A1B0GV85 526 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 E9PLN8 166 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 NDUFB3O43676 98 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 DRAM1Q8N682 238 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 OR1L4Q8NGR5 311 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 TAF15Q92804 592 aaKnown RBP eCLIP12.97□□□□□ -0.33
RIPK1-201ENST00000259808 DUXBA0A1W2PPF3 345 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 DBX1A6NMT0 343 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 NCBP2LA6PVI3 153 aaKnown RBP12.97□□□□□ -0.33
RIPK1-201ENST00000259808 ZNF253O75346 499 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 SMIM6P0DI80 62 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 CRISP2P16562 243 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 MEF2BQ02080 365 aaPredicted RBP12.97□□□□□ -0.33
RIPK1-201ENST00000259808 KHDC3LQ587J8 217 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 TMEM105Q8N8V8 129 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 GINS3Q9BRX5 216 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 DNPH1O43598 174 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 CNN1P51911 297 aaKnown RBP12.97□□□□□ -0.33
RIPK1-201ENST00000259808 RHOBP62745 196 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 C10orf128Q5T292 105 aa12.97□□□□□ -0.33
RIPK1-201ENST00000259808 NCOA6Q14686 2063 aaPredicted RBP12.97□□□□□ -0.33
RIPK1-201ENST00000259808 PINLYPA6NC86 204 aa12.96□□□□□ -0.33
RIPK1-201ENST00000259808 CLEC3BP05452 202 aa12.96□□□□□ -0.33
RIPK1-201ENST00000259808 CD55P08174 381 aa12.96□□□□□ -0.33
RIPK1-201ENST00000259808 PAX5Q02548 391 aa12.96□□□□□ -0.33
RIPK1-201ENST00000259808 CORO2AQ92828 525 aa12.96□□□□□ -0.33
RIPK1-201ENST00000259808 OR2V2Q96R30 315 aa12.96□□□□□ -0.33
RIPK1-201ENST00000259808 TECRQ9NZ01 308 aaKnown RBP12.96□□□□□ -0.33
RIPK1-201ENST00000259808 E9PQ18 207 aa12.96□□□□□ -0.33
RIPK1-201ENST00000259808 H0Y980 276 aa12.96□□□□□ -0.33
RIPK1-201ENST00000259808 KLF14Q8TD94 323 aaPredicted RBP12.96□□□□□ -0.33
RIPK1-201ENST00000259808 IMMP1LQ96LU5 166 aa12.96□□□□□ -0.33
RIPK1-201ENST00000259808 VAMP8Q9BV40 100 aa12.96□□□□□ -0.33
RIPK1-201ENST00000259808 LNP1A1A4G5 178 aa12.96□□□□□ -0.34
RIPK1-201ENST00000259808 CD1BP29016 333 aa12.96□□□□□ -0.34
RIPK1-201ENST00000259808 CTXND1A0A1B0GTU2 59 aa12.95□□□□□ -0.34
RIPK1-201ENST00000259808 CXorf65A6NEN9 183 aa12.95□□□□□ -0.34
RIPK1-201ENST00000259808 NPY1RP25929 384 aa12.95□□□□□ -0.34
RIPK1-201ENST00000259808 IL3RAP26951 378 aa12.95□□□□□ -0.34
RIPK1-201ENST00000259808 BHLHA15Q7RTS1 189 aaPredicted RBP12.95□□□□□ -0.34
RIPK1-201ENST00000259808 OR1B1Q8NGR6 318 aa12.95□□□□□ -0.34
RIPK1-201ENST00000259808 ITLN1Q8WWA0 313 aa12.95□□□□□ -0.34
RIPK1-201ENST00000259808 REG4Q9BYZ8 158 aa12.95□□□□□ -0.34
RIPK1-201ENST00000259808 RALYQ9UKM9 306 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms