RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 TMEM147Q9BVK8 224 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 KLF2Q9Y5W3 355 aaPredicted RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 CELSR3Q9NYQ7 3312 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 ACACAQ13085 2346 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 TRAV38-1A0A0B4J264 116 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 LY6G6EA0A0G2JKS1 128 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A10PA6NDY2 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A18PA6NE21 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A16PA6NEW6 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A20PA6NIJ5 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A8PA6NJQ4 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A7PA6NKC0 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A22PA8MWA6 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 KIAA1324LA8MWY0 1029 aaPredicted RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A12PA8MX19 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A5PA8MXJ8 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A23PA8MXZ1 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 B4DEV8 164 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 AQP7O14520 342 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 NDUFS6O75380 124 aaKnown RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 S1PR2O95136 353 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 MBP02144 154 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A15PP0C7V4 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A13PP0C7W8 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A14PP0C7W9 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FAM90A24PP0C7X0 464 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 MPLP40238 635 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 B3GALT5-AS1P59052 145 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 SERF2P84101 59 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 HTD2P86397 168 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 ZNF90Q03938 601 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 RAB31Q13636 194 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 FBXW9Q5XUX1 488 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 ABLIM2Q6H8Q1 611 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 CRIP3Q6Q6R5 217 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 BAGE3Q86Y29 109 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 BAGE2Q86Y30 109 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 Q8IYB0 196 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 OR2Z1Q8NG97 314 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 OR2T10Q8NGZ9 312 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 PPP1R35Q8TAP8 253 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 PLPPR1Q8TBJ4 325 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 OR5P3Q8WZ94 311 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 RAB24Q969Q5 203 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 TMEM18Q96B42 140 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 NEIL1Q96FI4 390 aaPredicted RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 TIMM8BQ9Y5J9 83 aaPredicted RBP4.03□□□□□ -1.76
USP44-201ENST00000258499 U3KQA8 63 aa4.03□□□□□ -1.76
USP44-201ENST00000258499 VPS13AQ96RL7 3174 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 NAPSAO96009 420 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 HBZP02008 142 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 SOD3P08294 240 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 SSTR5P35346 364 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 LINC00205P59089 165 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 TNFRSF9Q07011 255 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 ARL16Q0P5N6 197 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 ZNF525Q8N782 197 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 TMEM178AQ8NBL3 297 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 GATAD1Q8WUU5 269 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 CIB3Q96Q77 187 aaPredicted RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 WDR61Q9GZS3 305 aaKnown RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 PARLQ9H300 379 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 ZNF703Q9H7S9 590 aaPredicted RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 TREM2Q9NZC2 230 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 PITPNC1Q9UKF7 332 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 DMRT1Q9Y5R6 373 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 TRAPPC1Q9Y5R8 145 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 SPTAN1Q13813 2472 aaKnown RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 SPTBN1Q01082 2364 aaKnown RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 ELOA3CA0A087WX78 387 aaPredicted RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 CTXND1A0A1B0GTU2 59 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 F6UZH7 168 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 RAMP3O60896 148 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 NDUFB4O95168 129 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 GYPAP02724 150 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 SELENOVP59797 346 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 RPP30P78346 268 aaKnown RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 ZNF766Q5HY98 468 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 FAM53AQ6NSI3 398 aaPredicted RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 CDPF1Q6NVV7 123 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 FOXL2NBQ6ZUU3 175 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 C1orf210Q8IVY1 113 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 UBALD2Q8IYN6 164 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 VKORC1L1Q8N0U8 176 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 IL22RA2Q969J5 263 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 POM121L2Q96KW2 1035 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 DCTN5Q9BTE1 182 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 ZDHHC11Q9H8X9 412 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 DECR2Q9NUI1 292 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 FOXJ2Q9P0K8 574 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 ARHGAP21Q5T5U3 1957 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 REV3LO60673 3130 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 A0A1B0GV90 55 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 A8MXE2 369 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 TGOLN2O43493 480 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 CYC1P08574 325 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 MGST1P10620 155 aaKnown RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 HOXB1P14653 301 aaPredicted RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 G0S2P27469 103 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 THBS3P49746 956 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms