RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PAX5Q02548 391 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 ARPC1AQ92747 370 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 MRPL13Q9BYD1 178 aaKnown RBP11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 TINAGL1Q9GZM7 467 aaPredicted RBP11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 MTCL1Q9Y4B5 1905 aaKnown RBP11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 KBTBD11O94819 623 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 ORM2P19652 201 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 SNAI3Q3KNW1 292 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 BPIFA4PQ86YQ2 179 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 VSIG4Q9Y279 399 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 A0A0B4J293 547 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 C1QBP02746 253 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 C11orf87Q6NUJ2 197 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 ALX4Q9H161 411 aaPredicted RBP11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 ZNF230Q9UIE0 474 aaPredicted RBP11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 OR4C46A6NHA9 309 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 ADIRFQ15847 76 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 SRSF7Q16629 238 aaKnown RBP eCLIP11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 LRRC75AQ8NAA5 344 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 CEACAM18A8MTB9 384 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 H7BYZ3 331 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 GABRB1P18505 474 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 TMEM41BQ5BJD5 291 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 TM2D1Q9BX74 207 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 MRPL32Q9BYC8 188 aaKnown RBP11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 CRIM1Q9NZV1 1036 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 KIAA1671Q9BY89 1806 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 NPIPB7O75200 414 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 PTHLHP12272 177 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 DUSP14O95147 198 aaKnown RBP11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 SIGIRRQ6IA17 410 aa11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 MRPL30Q8TCC3 161 aaKnown RBP11.38□□□□□ -0.59
PRPF38A-201ENST00000257181 ELOA3CA0A087WX78 387 aaPredicted RBP11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 YPEL1O60688 119 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 CXorf1O96002 111 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 DLX6P56179 175 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 ZNF826PQ6ZT77 177 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 TEX45Q8NA69 505 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 YPEL2Q96QA6 119 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 MAGT1Q9H0U3 335 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 TICRRQ7Z2Z1 1910 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 GON4LQ3T8J9 2241 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 BOLA2-SMG1P6H3BVE0 249 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 NBR2O15453 112 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 POLR2GP62487 172 aaKnown RBP eCLIP11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 DGAT2L7PQ6IED9 249 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 HLA-DRB5Q30154 266 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 LINC00303Q3SY05 128 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 GGACTQ9BVM4 153 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 PINLYPA6NC86 204 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 FAM90A9PA6NNJ1 464 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 KLF4O43474 513 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 IGHV1-46P01743 117 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 CCL1P22362 96 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 ZNF90Q03938 601 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 WDFY1Q8IWB7 410 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 OR13A1Q8NGR1 328 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 PHYHIPLQ96FC7 376 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 PQLC2LA1A4F0 135 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 RNF212Q495C1 297 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 C17orf50Q8WW18 174 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 LINC00052Q96N35 136 aa11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 NAA50Q9GZZ1 169 aaKnown RBP11.37□□□□□ -0.59
PRPF38A-201ENST00000257181 TCF21O43680 179 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 RD3LP0DJH9 198 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 MST1P26927 711 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 FAM74A3Q4VXF1 159 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 OR5H6Q8NGV6 325 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 SLX1AQ9BQ83 275 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 PRORYQ9H606 182 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 ZNF727A8MUV8 499 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 F5H697 171 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 VSIG10L2P0DP72 767 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 H3F3AP84243 136 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 ZNF154Q13106 437 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 RIGQ13278 110 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 RHOVQ96L33 236 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 NLRC5Q86WI3 1866 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 AGPAT2O15120 278 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 DEDDO75618 318 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 PRSS53Q2L4Q9 553 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 KIR3DL3Q8N743 410 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 OR10G4Q8NGN3 311 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 OR10G9Q8NGN4 311 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 OR10G7Q8NGN6 311 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 MSMBP08118 114 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 ZNF735P0CB33 412 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 GNG4P50150 75 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 OR5M8Q8NGP6 311 aa11.36□□□□□ -0.59
PRPF38A-201ENST00000257181 C17orf51A8MQB3 221 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 NTN1O95631 604 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 CD37P11049 281 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 SLC25A22Q9H936 323 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 GNG13Q9P2W3 67 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 SMIM18P0DKX4 95 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 WDR73Q6P4I2 378 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 SSX7Q7RTT5 188 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 RNASEH2CQ8TDP1 164 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms