RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ROS1P08922 2347 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 IGHV3-7P01780 117 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 ETV3LQ6ZN32 361 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 RARRES2Q99969 163 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 DFFBO76075 338 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 CD40P25942 277 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 TDGF1P3P51864 188 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 TAS2R30P59541 319 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 HTD2P86397 168 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 AKIRIN2Q53H80 203 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 SLC25A24Q6NUK1 477 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 SPSB3Q6PJ21 355 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 Q8NA96 180 aa18.04■□□□□ 0.48
CLN6-201ENST00000249806 MGST3O14880 152 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 P0C879 139 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 SELLP14151 372 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 GZMHP20718 246 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 EDDM3BP56851 147 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 TNFRSF9Q07011 255 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 FAM90A1Q86YD7 464 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 COA4Q9NYJ1 87 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 PRRG2O14669 202 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 PROP1O75360 226 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 IFNA5P01569 189 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 ADH4P08319 380 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 RSG1Q9BU20 258 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 RBKSQ9H477 322 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 GNG12Q9UBI6 72 aa18.03■□□□□ 0.48
CLN6-201ENST00000249806 H2AFB1P0C5Y9 115 aa18.02■□□□□ 0.48
CLN6-201ENST00000249806 AKR1C8PQ5T2L2 129 aa18.02■□□□□ 0.48
CLN6-201ENST00000249806 TRAT1Q6PIZ9 186 aa18.02■□□□□ 0.48
CLN6-201ENST00000249806 KPTNQ9Y664 436 aa18.02■□□□□ 0.48
CLN6-201ENST00000249806 MORN2Q502X0 79 aa18.02■□□□□ 0.47
CLN6-201ENST00000249806 SPACA3Q8IXA5 215 aa18.02■□□□□ 0.47
CLN6-201ENST00000249806 ZNF525Q8N782 197 aa18.02■□□□□ 0.47
CLN6-201ENST00000249806 PBDC1Q9BVG4 233 aa18.02■□□□□ 0.47
CLN6-201ENST00000249806 GCM1Q9NP62 436 aa18.02■□□□□ 0.47
CLN6-201ENST00000249806 KALRNO60229 2985 aa18.01■□□□□ 0.47
CLN6-201ENST00000249806 IGHV1-46P01743 117 aa18.01■□□□□ 0.47
CLN6-201ENST00000249806 DUX4L9Q6RFH8 374 aaPredicted RBP18.01■□□□□ 0.47
CLN6-201ENST00000249806 LFNGQ8NES3 379 aa18.01■□□□□ 0.47
CLN6-201ENST00000249806 PPP1R35Q8TAP8 253 aa18.01■□□□□ 0.47
CLN6-201ENST00000249806 HSPB7Q9UBY9 170 aa18.01■□□□□ 0.47
CLN6-201ENST00000249806 LRRC30A6NM36 301 aa18■□□□□ 0.47
CLN6-201ENST00000249806 FAM90A26D6RGX4 464 aa18■□□□□ 0.47
CLN6-201ENST00000249806 AKR1C3P42330 323 aa18■□□□□ 0.47
CLN6-201ENST00000249806 SELENOVP59797 346 aa18■□□□□ 0.47
CLN6-201ENST00000249806 TNFAIP6P98066 277 aaPredicted RBP18■□□□□ 0.47
CLN6-201ENST00000249806 UTF1Q5T230 341 aa18■□□□□ 0.47
CLN6-201ENST00000249806 NCR3LG1Q68D85 454 aa18■□□□□ 0.47
CLN6-201ENST00000249806 TGIF2LYQ8IUE0 185 aa18■□□□□ 0.47
CLN6-201ENST00000249806 SFT2D1Q8WV19 159 aa18■□□□□ 0.47
CLN6-201ENST00000249806 SSUH2Q9Y2M2 353 aa18■□□□□ 0.47
CLN6-201ENST00000249806 CYB5R3P00387 301 aaPredicted RBP18■□□□□ 0.47
CLN6-201ENST00000249806 OR13C7P0DN81 318 aa18■□□□□ 0.47
CLN6-201ENST00000249806 ZNF134P52741 427 aa18■□□□□ 0.47
CLN6-201ENST00000249806 RPS23P62266 143 aaKnown RBP18■□□□□ 0.47
CLN6-201ENST00000249806 MSMO1Q15800 293 aa18■□□□□ 0.47
CLN6-201ENST00000249806 ZNF66Q6ZN08 573 aa18■□□□□ 0.47
CLN6-201ENST00000249806 HSD17B10Q99714 261 aaKnown RBP18■□□□□ 0.47
CLN6-201ENST00000249806 SCNM1Q9BWG6 230 aa18■□□□□ 0.47
CLN6-201ENST00000249806 CTNNBIP1Q9NSA3 81 aaPredicted RBP18■□□□□ 0.47
CLN6-201ENST00000249806 CLN8Q9UBY8 286 aa18■□□□□ 0.47
CLN6-201ENST00000249806 GATA4P43694 442 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 GPR12P47775 334 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 LOXL3P58215 753 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 CR1LQ2VPA4 569 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 MRGPRGQ86SM5 289 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 LILRB2Q8N423 598 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 DEFB108BQ8NET1 73 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 SCGB1C1Q8TD33 95 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 CLDN14O95500 239 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 HBG1P69891 147 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 HBG2P69892 147 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 HFEQ30201 348 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 SP5Q6BEB4 398 aaPredicted RBP17.99■□□□□ 0.47
CLN6-201ENST00000249806 OR8G2PQ6IF36 304 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 GFRALQ6UXV0 394 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 EDARADDQ8WWZ3 215 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 SLC35B3Q9H1N7 401 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 VSIRQ9H7M9 311 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 RNF7Q9UBF6 113 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 IL19Q9UHD0 177 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 HCFC1P51610 2035 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 DSCAML1Q8TD84 2053 aa17.99■□□□□ 0.47
CLN6-201ENST00000249806 DYSFO75923 2080 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 C16orf97H3BN30 126 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 CD55P08174 381 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 H2BFWTQ7Z2G1 175 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 WFDC8Q8IUA0 241 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 ZDHHC16Q969W1 377 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 OR4C12Q96R67 309 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 C20orf24Q9BUV8 137 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 SEBOXQ9HB31 216 aaPredicted RBP17.98■□□□□ 0.47
CLN6-201ENST00000249806 JPT1Q9UK76 154 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 RBFOX3A6NFN3 312 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 DUTP33316 252 aaKnown RBP17.98■□□□□ 0.47
CLN6-201ENST00000249806 TBR1Q16650 682 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 HAGHQ16775 308 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 PRR30Q53SZ7 412 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms