RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ADAD2Q8NCV1 583 aaKnown RBP10.56□□□□□ -0.72
LSM8-201ENST00000249299 OR10X1Q8NGY0 326 aa10.56□□□□□ -0.72
LSM8-201ENST00000249299 PHB2Q99623 299 aa10.56□□□□□ -0.72
LSM8-201ENST00000249299 OR51J1Q9H342 316 aa10.56□□□□□ -0.72
LSM8-201ENST00000249299 LPAR2Q9HBW0 351 aa10.56□□□□□ -0.72
LSM8-201ENST00000249299 LIN7CQ9NUP9 197 aaKnown RBP10.56□□□□□ -0.72
LSM8-201ENST00000249299 SDHAF2Q9NX18 166 aa10.56□□□□□ -0.72
LSM8-201ENST00000249299 KCNS2Q9ULS6 477 aa10.56□□□□□ -0.72
LSM8-201ENST00000249299 MINOS1-NBL1R4GNA1 71 aa10.56□□□□□ -0.72
LSM8-201ENST00000249299 KIAA2026Q5HYC2 2103 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 CREBBPQ92793 2442 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 A0A0B4J293 547 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 C3orf85A0A1B0GTC6 90 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 H0Y980 276 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 HSD17B6O14756 317 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 RBFOX2O43251 390 aaKnown RBP eCLIP10.55□□□□□ -0.72
LSM8-201ENST00000249299 PI3P19957 117 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 CEACAM3P40198 252 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 KIR2DS2P43631 304 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 BPIFB3P59826 476 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 SUPT4H1P63272 117 aaKnown RBP10.55□□□□□ -0.72
LSM8-201ENST00000249299 PPP1R1AQ13522 171 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 TMEM249Q2WGJ8 235 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 HLA-DRB5Q30154 266 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 PHLDA2Q53GA4 152 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 DCAF12L2Q5VW00 463 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 ZNF833PQ6ZTB9 187 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 TBC1D26Q86UD7 250 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 ODF3L1Q8IXM7 274 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 COQ8AQ8NI60 647 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 ASB13Q8WXK3 278 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 IL22RA2Q969J5 263 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 ST6GALNAC6Q969X2 333 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 ZNF251Q9BRH9 671 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 PCGF1Q9BSM1 259 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 PRELID3BQ9Y3B1 194 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 ALG5Q9Y673 324 aa10.55□□□□□ -0.72
LSM8-201ENST00000249299 DOCK11Q5JSL3 2073 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 DUXBA0A1W2PPF3 345 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 ODF3BA8MYP8 253 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 BUB1B-PAK6H3BSN5 160 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 RRASP10301 218 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 HLA-GP17693 338 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 VAMP1P23763 118 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 UCP1P25874 307 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 THBS3P49746 956 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 MIDNQ504T8 468 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 FAM53AQ6NSI3 398 aaPredicted RBP10.54□□□□□ -0.72
LSM8-201ENST00000249299 VMO1Q7Z5L0 202 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 LYG1Q8N1E2 194 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 TEX29Q8N6K0 151 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 CAPSLQ8WWF8 208 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 LEAP2Q969E1 77 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 ABHD14BQ96IU4 210 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 TMEM222Q9H0R3 208 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 RNF150Q9ULK6 438 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 TBL2Q9Y4P3 447 aaKnown RBP10.54□□□□□ -0.72
LSM8-201ENST00000249299 PDZD2O15018 2839 aa10.54□□□□□ -0.72
LSM8-201ENST00000249299 ASH1LQ9NR48 2969 aaKnown RBP10.53□□□□□ -0.72
LSM8-201ENST00000249299 NBPF19A0A087WUL8 3843 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 SAA2-SAA4A0A096LPE2 208 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 HMX3A6NHT5 357 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 LEUTXA8MZ59 168 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 SLC31A2O15432 143 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 PROP1O75360 226 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 ATG12O94817 140 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 CDS2O95674 445 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 SAA2P0DJI9 122 aaPredicted RBP10.53□□□□□ -0.72
LSM8-201ENST00000249299 EPHA1P21709 976 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 HTR1DP28221 377 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 DUTP33316 252 aaKnown RBP10.53□□□□□ -0.72
LSM8-201ENST00000249299 GNG10P50151 68 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 BCAP31P51572 246 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 RRAS2P62070 204 aaPredicted RBP10.53□□□□□ -0.72
LSM8-201ENST00000249299 TMEM187Q14656 261 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 DHRS7BQ6IAN0 325 aaPredicted RBP10.53□□□□□ -0.72
LSM8-201ENST00000249299 HCP5Q6MZN7 132 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 CADM3Q8N126 398 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 LGI3Q8N145 548 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 C12orf45Q8N5I9 185 aaPredicted RBP10.53□□□□□ -0.72
LSM8-201ENST00000249299 GLYATL2Q8WU03 294 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 MSI2Q96DH6 328 aaKnown RBP10.53□□□□□ -0.72
LSM8-201ENST00000249299 TMEM56Q96MV1 263 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 TBX15Q96SF7 602 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 MED28Q9H204 178 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 HIF1ANQ9NWT6 349 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 DPM3Q9P2X0 92 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 AUP1Q9Y679 476 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 TMEM56-RWDD3S4R434 201 aa10.53□□□□□ -0.72
LSM8-201ENST00000249299 DBX1A6NMT0 343 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 LY6LH3BQJ8 138 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 GAPDHP04406 335 aaKnown RBP10.52□□□□□ -0.73
LSM8-201ENST00000249299 SERPINE2P07093 398 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 IGHV4-31P0DP07 118 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 MC5RP33032 325 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 ZNF816Q0VGE8 651 aaPredicted RBP10.52□□□□□ -0.73
LSM8-201ENST00000249299 CBX3Q13185 183 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 CYB5R2Q6BCY4 276 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 CCDC144NLQ6NUI1 221 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 OR8H3Q8N146 312 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms