RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 B2MP61769 119 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 FAM214BQ7L5A3 538 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 RPP25LQ8N5L8 163 aaKnown RBP21.42■■□□□ 1.02
RAB40C-201ENST00000248139 TCTEX1D2Q8WW35 142 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 TAF15Q92804 592 aaKnown RBP eCLIP21.42■■□□□ 1.02
RAB40C-201ENST00000248139 GSN-AS1Q9NRJ2 163 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 TMEM30CPA0ZSE6 113 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 ODAMA1E959 279 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 MAS1LP35410 378 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 PDZD11Q5EBL8 140 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 ZNF645Q8N7E2 425 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 CA5BP1Q8WTZ4 195 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 ZG16O60844 167 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 TRGC2P03986 189 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 SMIM6P0DI80 62 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 RD3LP0DJH9 198 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 DPPA3Q6W0C5 159 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 SPNS3Q6ZMD2 512 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 MAP1LC3B2A6NCE7 125 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 PPIHO43447 177 aaKnown RBP21.41■■□□□ 1.02
RAB40C-201ENST00000248139 RBMXL2O75526 392 aaKnown RBP21.41■■□□□ 1.02
RAB40C-201ENST00000248139 FABP1P07148 127 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 C9orf106Q8NAJ2 232 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 GATAD1Q8WUU5 269 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 MAP1LC3BQ9GZQ8 125 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 SLC25A22Q9H936 323 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 CLCF1Q9UBD9 225 aa21.41■■□□□ 1.02
RAB40C-201ENST00000248139 IFITM10A6NMD0 228 aa21.4■■□□□ 1.02
RAB40C-201ENST00000248139 ST8SIA5O15466 376 aa21.4■■□□□ 1.02
RAB40C-201ENST00000248139 EDDM3AQ14507 147 aa21.4■■□□□ 1.02
RAB40C-201ENST00000248139 OR13A1Q8NGR1 328 aa21.4■■□□□ 1.02
RAB40C-201ENST00000248139 TRAV1-1A0A0B4J248 108 aa21.4■■□□□ 1.02
RAB40C-201ENST00000248139 TIMM8AO60220 97 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-201ENST00000248139 EIF2S3P41091 472 aaKnown RBP21.4■■□□□ 1.02
RAB40C-201ENST00000248139 C4orf17Q53FE4 359 aa21.4■■□□□ 1.02
RAB40C-201ENST00000248139 GFI1BQ5VTD9 330 aa21.4■■□□□ 1.02
RAB40C-201ENST00000248139 ACSM6Q6P461 480 aa21.4■■□□□ 1.02
RAB40C-201ENST00000248139 DOK5Q9P104 306 aa21.4■■□□□ 1.02
RAB40C-201ENST00000248139 DCHS1Q96JQ0 3298 aa21.4■■□□□ 1.02
RAB40C-201ENST00000248139 WT1P19544 449 aaPredicted RBP21.39■■□□□ 1.01
RAB40C-201ENST00000248139 SLC35E3Q7Z769 313 aa21.39■■□□□ 1.01
RAB40C-201ENST00000248139 LINC00473A8K010 186 aa21.39■■□□□ 1.01
RAB40C-201ENST00000248139 KIR2DL2P43627 348 aaPredicted RBP21.39■■□□□ 1.01
RAB40C-201ENST00000248139 Q6ZT83 130 aa21.39■■□□□ 1.01
RAB40C-201ENST00000248139 WDR31Q8NA23 367 aa21.39■■□□□ 1.01
RAB40C-201ENST00000248139 MBD3L1Q8WWY6 194 aa21.39■■□□□ 1.01
RAB40C-201ENST00000248139 LHX4Q969G2 390 aa21.39■■□□□ 1.01
RAB40C-201ENST00000248139 CISD1Q9NZ45 108 aaKnown RBP21.39■■□□□ 1.01
RAB40C-201ENST00000248139 MIOXQ9UGB7 285 aa21.39■■□□□ 1.01
RAB40C-201ENST00000248139 COL10A1Q03692 680 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 WDR82Q6UXN9 313 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 CEP250Q9BV73 2442 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 A0A087WWC5 75 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 WNT2P09544 360 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 TFF3Q07654 80 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 TMEM41BQ5BJD5 291 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 TMEM14EPQ6UXP3 125 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 ACP7Q6ZNF0 438 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 HES4Q9HCC6 221 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 PSG11Q9UQ72 335 aa21.38■■□□□ 1.01
RAB40C-201ENST00000248139 Q3ZCU0 254 aa21.37■■□□□ 1.01
RAB40C-201ENST00000248139 CDPF1Q6NVV7 123 aa21.37■■□□□ 1.01
RAB40C-201ENST00000248139 C1QL4Q86Z23 238 aa21.37■■□□□ 1.01
RAB40C-201ENST00000248139 PSMG3Q9BT73 122 aaPredicted RBP21.37■■□□□ 1.01
RAB40C-201ENST00000248139 FAM234AQ9H0X4 552 aa21.37■■□□□ 1.01
RAB40C-201ENST00000248139 SLC39A9Q9NUM3 307 aa21.37■■□□□ 1.01
RAB40C-201ENST00000248139 CACNA1GO43497 2377 aa21.37■■□□□ 1.01
RAB40C-201ENST00000248139 ZNF737O75373 536 aa21.37■■□□□ 1.01
RAB40C-201ENST00000248139 CECR9P0C854 216 aa21.37■■□□□ 1.01
RAB40C-201ENST00000248139 NINJ1Q92982 152 aa21.37■■□□□ 1.01
RAB40C-201ENST00000248139 ZNF251Q9BRH9 671 aa21.37■■□□□ 1.01
RAB40C-201ENST00000248139 LRRC30A6NM36 301 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HSPB7Q9UBY9 170 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST1H2BKO60814 126 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST1H2BJP06899 126 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 BMP5P22003 454 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST1H2BOP23527 126 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST1H2BBP33778 126 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST1H2BDP58876 126 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST1H2BCP62807 126 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST2H2BEQ16778 126 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST2H2BFQ5QNW6 126 aaPredicted RBP21.36■■□□□ 1.01
RAB40C-201ENST00000248139 INO80CQ6PI98 192 aaPredicted RBP21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST1H2BHQ93079 126 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST1H2BNQ99877 126 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIST1H2BMQ99879 126 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HIPK2Q9H2X6 1198 aa21.36■■□□□ 1.01
RAB40C-201ENST00000248139 HOXC12P31275 282 aa21.35■■□□□ 1.01
RAB40C-201ENST00000248139 TRIP6Q15654 476 aaKnown RBP21.35■■□□□ 1.01
RAB40C-201ENST00000248139 CLEC12BQ2HXU8 276 aa21.35■■□□□ 1.01
RAB40C-201ENST00000248139 FIP1L1Q6UN15 594 aaKnown RBP21.35■■□□□ 1.01
RAB40C-201ENST00000248139 ZNF610Q8N9Z0 462 aa21.35■■□□□ 1.01
RAB40C-201ENST00000248139 TRBV23-1A0A0A0MS06 115 aa21.35■■□□□ 1.01
RAB40C-201ENST00000248139 OOEPA6NGQ2 149 aa21.35■■□□□ 1.01
RAB40C-201ENST00000248139 SERF2P84101 59 aa21.35■■□□□ 1.01
RAB40C-201ENST00000248139 SSX9Q7RTT3 188 aa21.35■■□□□ 1.01
RAB40C-201ENST00000248139 RPUSD4Q96CM3 377 aaKnown RBP21.35■■□□□ 1.01
RAB40C-201ENST00000248139 RNF212BA8MTL3 300 aa21.34■■□□□ 1.01
RAB40C-201ENST00000248139 NECAP1Q8NC96 275 aa21.34■■□□□ 1.01
RAB40C-201ENST00000248139 OPN3Q9H1Y3 402 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms