RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ZNF738Q8NE65 137 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 RNF133Q8WVZ7 376 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 IGHV3-49A0A0A0MS15 119 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 A0A1W2PPC4 97 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 THY1P04216 161 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 CRYBA2P53672 197 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 MDP1Q86V88 176 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 SLC25A40Q8TBP6 338 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 Q8WTZ3 238 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 COL16A1Q07092 1604 aaPredicted RBP6.51□□□□□ -1.37
RIF1-201ENST00000243326 IGSF23A1L1A6 192 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 USP54Q70EL1 1684 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 A0A1B0GV72 72 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 IGHEP01854 428 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 TFF3Q07654 80 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 ZXDCQ2QGD7 858 aaPredicted RBP6.51□□□□□ -1.37
RIF1-201ENST00000243326 PAXXQ9BUH6 204 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 GOSR1O95249 250 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 RPS4Y1P22090 263 aaKnown RBP6.51□□□□□ -1.37
RIF1-201ENST00000243326 TAS2R60P59551 318 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 TMEM191AQ9H0A3 160 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 DOCK3Q8IZD9 2030 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 IGHV3OR16-10A0A075B7F0 116 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 C5orf66Q9H5L9 145 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 CRYABP02511 175 aaKnown RBP6.51□□□□□ -1.37
RIF1-201ENST00000243326 LEMD1Q68G75 181 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 OR1N2Q8NGR9 330 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 M0QZK8 103 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 GGCTO75223 188 aaKnown RBP6.51□□□□□ -1.37
RIF1-201ENST00000243326 NUBP1P53384 320 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 VMA21Q3ZAQ7 101 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 GPR35Q9HC97 309 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 PIPOXQ9P0Z9 390 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 ZNF818PQ6ZRF7 136 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 PATE3B3GLJ2 98 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 GBGT1Q8N5D6 347 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 SPSB1Q96BD6 273 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 COX14Q96I36 57 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 ASCL2Q99929 193 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 AUP1Q9Y679 476 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 OPN3Q9H1Y3 402 aaPredicted RBP6.5□□□□□ -1.37
RIF1-201ENST00000243326 IGHV3-66A0A0C4DH42 116 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 SPTY2D1-AS1A0A0U1RR47 76 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 C1QL4Q86Z23 238 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 KIR3DL3Q8N743 410 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 LINC00469Q8N7U9 141 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 OR2H1Q9GZK4 316 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 RPL36A-HNRNPH2H7BZ11 118 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 GCSAMLQ5JQS6 135 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 CTXND1A0A1B0GTU2 59 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 PEAR1Q5VY43 1037 aaPredicted RBP6.5□□□□□ -1.37
RIF1-201ENST00000243326 MRGPRGQ86SM5 289 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 SSBP4Q9BWG4 385 aaPredicted RBP6.5□□□□□ -1.37
RIF1-201ENST00000243326 TRGV5A0A0B4J1U4 118 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 ATP5G3P48201 142 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 ABHD12Q8N2K0 398 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 ADAMTS17Q8TE56 1095 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 BOD1Q96IK1 185 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 ZNF506Q5JVG8 444 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 OR10S1Q8NGN2 331 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 FBLIM1Q8WUP2 373 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 RPEQ96AT9 228 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 TMEM177Q53S58 311 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 FAM162BQ5T6X4 162 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 PHOSPHO2Q8TCD6 241 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 YBX2Q9Y2T7 364 aaKnown RBP6.5□□□□□ -1.37
RIF1-201ENST00000243326 SBF2Q86WG5 1849 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 TLN2Q9Y4G6 2542 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 IGHV1OR21-1A0A087WYE8 117 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 K7EQS6 105 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 ZG16O60844 167 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 LIMS1P48059 325 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 FOXC2Q99958 501 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 IGHV3OR16-13A0A075B7E8 117 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 IGHV3-74A0A0B4J1X5 117 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 HSPB2A8KAH6 182 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 HSPB2Q16082 182 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 CRYBB3P26998 211 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 BRS3P32247 399 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 FNDC4Q9H6D8 234 aaPredicted RBP6.5□□□□□ -1.37
RIF1-201ENST00000243326 PGPEP1LA6NFU8 196 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 GFRALQ6UXV0 394 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 BMPERQ8N8U9 685 aa6.5□□□□□ -1.37
RIF1-201ENST00000243326 QTRT1Q9BXR0 403 aaKnown RBP6.5□□□□□ -1.37
RIF1-201ENST00000243326 ZNF788Q6ZQV5 615 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 NR2C2APQ86WQ0 139 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 TMEM252Q8N6L7 170 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 OR4A8P0C604 315 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 LOXL3P58215 753 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 LRRC10Q5BKY1 277 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 IGKV3OR2-268A0A0C4DH90 116 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 EDARADDQ8WWZ3 215 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 WNT9BO14905 357 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 OR2M3Q8NG83 312 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 CXXC4Q9H2H0 198 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 SCO2A0A1W2PP80 73 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 PROB1E7EW31 1015 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 RRHO14718 337 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 ERGP11308 486 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 ACP1P24666 158 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms