RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 TMEM14EPQ6UXP3 125 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 C1orf210Q8IVY1 113 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 DLL3Q9NYJ7 618 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 GNG13Q9P2W3 67 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 CER1O95813 267 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 ERVK11-1P61568 191 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 SERF2P84101 59 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 NUFIP2Q7Z417 695 aaKnown RBP10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 MKXQ8IYA7 352 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 APH1AQ96BI3 265 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 OR51I2Q9H344 312 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 DUSP13Q9UII6 198 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 TRAPPC2LQ9UL33 140 aa10.09□□□□□ -0.79
SEC61A1-201ENST00000243253 OR4X1Q8NH49 305 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 OR5R1Q8NH85 324 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 RBKSQ9H477 322 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 OBP2BQ9NPH6 170 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 MBNL3Q9NUK0 354 aaKnown RBP10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 SYNGR2O43760 224 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 PGA5P0DJD9 388 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 DUSP3P51452 185 aaPredicted RBP10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 USF2Q15853 346 aaPredicted RBP10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 ZNF497Q6ZNH5 498 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 RHOVQ96L33 236 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 RIMS4Q9H426 269 aaPredicted RBP10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 AURKAIP1Q9NWT8 199 aaPredicted RBP10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 CLDN34H7C241 214 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 CDIPTO14735 213 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 MDH2P40926 338 aaKnown RBP10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 BTNL3Q6UXE8 466 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 OR10V1Q8NGI7 309 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 SDSLQ96GA7 329 aa10.08□□□□□ -0.8
SEC61A1-201ENST00000243253 A0A0U1RQK1 487 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 LNP1A1A4G5 178 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 MKRN2OSH3BPM6 223 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 METTL15P1P0C7V9 234 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 S100A2P29034 98 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 IL2RGP31785 369 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 RAB11AP62491 216 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 TMEM41BQ5BJD5 291 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 SPANXN5Q5MJ07 72 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 ZNF787Q6DD87 383 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 NECAP1Q8NC96 275 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 OR51G1Q8NGK1 321 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 HINT2Q9BX68 163 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 SPRY4Q9C004 299 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 LY86O95711 162 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 KRASP01116 189 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 GZMBP10144 247 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 ZNF816Q0VGE8 651 aaPredicted RBP10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 MRGPRGQ86SM5 289 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 MSL2Q9HCI7 577 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 CACNG5Q9UF02 275 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 VAX2Q9UIW0 290 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 BOKQ9UMX3 212 aaPredicted RBP10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 NEURL1O76050 574 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 APLNRP35414 380 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 CLN3Q13286 438 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 ACSM6Q6P461 480 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 CTDSP1Q9GZU7 261 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 WIPI2Q9Y4P8 454 aa10.07□□□□□ -0.8
SEC61A1-201ENST00000243253 DEGS1O15121 323 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 TRA2AQ13595 282 aaKnown RBP eCLIP10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 CYP2G1PQ6ZSU1 146 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 TMEM183AQ8IXX5 376 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 C1orf87Q8N0U7 546 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 APOBEC3DQ96AK3 386 aaPredicted RBP10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 OR4C12Q96R67 309 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 PLK3Q9H4B4 646 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 ZNF703Q9H7S9 590 aaPredicted RBP10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 TIMM9Q9Y5J7 89 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 PPP1R2P9O14990 202 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 NXPH2O95156 264 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 OR10J5Q8NHC4 309 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 PFDN5Q99471 154 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 SRD5A3Q9H8P0 318 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 B4GALT7Q9UBV7 327 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 AKAP13Q12802 2813 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 SMCO3A2RU48 225 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 ANKRD30BLA7E2S9 258 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 AMBPP02760 352 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 OPN1MWP04001 364 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 OPN1MW2P0DN77 364 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 OPN1MW3P0DN78 364 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 JOSD1Q15040 202 aaPredicted RBP10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 TRIP6Q15654 476 aaKnown RBP10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 DMRTC2Q8IXT2 367 aaPredicted RBP10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 PKIBQ9C010 78 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 TNCP24821 2201 aa10.06□□□□□ -0.8
SEC61A1-201ENST00000243253 CD300LBA8K4G0 201 aa10.05□□□□□ -0.8
SEC61A1-201ENST00000243253 FABP4P15090 132 aa10.05□□□□□ -0.8
SEC61A1-201ENST00000243253 NPPCP23582 126 aa10.05□□□□□ -0.8
SEC61A1-201ENST00000243253 RPL23P62829 140 aaKnown RBP10.05□□□□□ -0.8
SEC61A1-201ENST00000243253 LRP11Q86VZ4 500 aa10.05□□□□□ -0.8
SEC61A1-201ENST00000243253 TMEM251Q8N6I4 163 aa10.05□□□□□ -0.8
SEC61A1-201ENST00000243253 DEFB108BQ8NET1 73 aa10.05□□□□□ -0.8
SEC61A1-201ENST00000243253 TAF15Q92804 592 aaKnown RBP eCLIP10.05□□□□□ -0.8
SEC61A1-201ENST00000243253 ACTR3CQ9C0K3 210 aaPredicted RBP10.05□□□□□ -0.8
SEC61A1-201ENST00000243253 OR2J1Q9GZK6 312 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms