RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 TFF3Q07654 80 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 Q3ZCU0 254 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 YPEL4Q96NS1 127 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 MAP1LC3BQ9GZQ8 125 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 AURKAIP1Q9NWT8 199 aaPredicted RBP14.13□□□□□ -0.15
SSPN-201ENST00000242729 PSG11Q9UQ72 335 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 OTOGLQ3ZCN5 2332 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 IGHV3OR15-7A0A075B7D8 119 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 TRBV6-6A0A0A6YYG2 114 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 WT1P19544 449 aaPredicted RBP14.13□□□□□ -0.15
SSPN-201ENST00000242729 TUBG1P23258 451 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 MDH2P40926 338 aaKnown RBP14.13□□□□□ -0.15
SSPN-201ENST00000242729 FAM90A2PQ658T7 463 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 RPP25LQ8N5L8 163 aaKnown RBP14.13□□□□□ -0.15
SSPN-201ENST00000242729 OR13A1Q8NGR1 328 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 COQ2Q96H96 371 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 TREM2Q9NZC2 230 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 DOK5Q9P104 306 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 METTL1Q9UBP6 276 aaKnown RBP14.13□□□□□ -0.15
SSPN-201ENST00000242729 DUSP13Q9UII6 198 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 ODAMA1E959 279 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 IFITM10A6NMD0 228 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 BCL2P10415 239 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 BRWD1-AS2P59051 145 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 VHLLQ6RSH7 139 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 FIP1L1Q6UN15 594 aaKnown RBP14.12□□□□□ -0.15
SSPN-201ENST00000242729 LHX4Q969G2 390 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 SPAARA0A1B0GVQ0 90 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 LINC00473A8K010 186 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 CEACAM1P13688 526 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 RAC2P15153 192 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 TNFSF10P50591 281 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 TGFBR3Q03167 851 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 TNFRSF9Q07011 255 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 UTF1Q5T230 341 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 ACSM6Q6P461 480 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 C9orf106Q8NAJ2 232 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 NINJ1Q92982 152 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 LEAP2Q969E1 77 aa14.12□□□□□ -0.15
SSPN-201ENST00000242729 WDR61Q9GZS3 305 aaKnown RBP14.12□□□□□ -0.15
SSPN-201ENST00000242729 A0A1B0GW64 132 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 BTBD17A6NE02 478 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 HBE1P02100 147 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 HBG1P69891 147 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 HBG2P69892 147 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 COL10A1Q03692 680 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 RTP5Q14D33 572 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 ADIRFQ15847 76 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 GABRA6Q16445 453 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 C11orf53Q8IXP5 236 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 TAF15Q92804 592 aaKnown RBP eCLIP14.11□□□□□ -0.15
SSPN-201ENST00000242729 ZNF883P0CG24 379 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 EGR1P18146 543 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 LRRC75BQ2VPJ9 315 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 SPRNQ5BIV9 151 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 OPN3Q9H1Y3 402 aaPredicted RBP14.11□□□□□ -0.15
SSPN-201ENST00000242729 UNKLQ9H9P5 680 aaKnown RBP14.11□□□□□ -0.15
SSPN-201ENST00000242729 SLC39A9Q9NUM3 307 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 HOXC12P31275 282 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 EIF2S3P41091 472 aaKnown RBP14.11□□□□□ -0.15
SSPN-201ENST00000242729 ZNF146Q15072 292 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 KHDC3LQ587J8 217 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 GCSAMLQ5JQS6 135 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 SP5Q6BEB4 398 aaPredicted RBP14.11□□□□□ -0.15
SSPN-201ENST00000242729 FAM214BQ7L5A3 538 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 LSM10Q969L4 123 aaKnown RBP14.11□□□□□ -0.15
SSPN-201ENST00000242729 POM121Q96HA1 1249 aa14.11□□□□□ -0.15
SSPN-201ENST00000242729 GMPPAQ96IJ6 420 aaPredicted RBP14.11□□□□□ -0.15
SSPN-201ENST00000242729 MBNL3Q9NUK0 354 aaKnown RBP14.11□□□□□ -0.15
SSPN-201ENST00000242729 ANKRD11Q6UB99 2663 aaPredicted RBP14.1□□□□□ -0.15
SSPN-201ENST00000242729 TMEM30CPA0ZSE6 113 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
SSPN-201ENST00000242729 ZNF737O75373 536 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 FAM201AQ5SY85 155 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 LRP11Q86VZ4 500 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 TMEM178AQ8NBL3 297 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 PPIHO43447 177 aaKnown RBP14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST1H2BKO60814 126 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST1H2BJP06899 126 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 CECR9P0C854 216 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST1H2BOP23527 126 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST1H2BBP33778 126 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST1H2BDP58876 126 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 B2MP61769 119 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST1H2BCP62807 126 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST2H2BEQ16778 126 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.1□□□□□ -0.15
SSPN-201ENST00000242729 CA5BP1Q8WTZ4 195 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST1H2BHQ93079 126 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST1H2BNQ99877 126 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 HIST1H2BMQ99879 126 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 GPR61Q9BZJ8 451 aa14.1□□□□□ -0.15
SSPN-201ENST00000242729 POLEQ07864 2286 aa14.09□□□□□ -0.15
SSPN-201ENST00000242729 PKDREJQ9NTG1 2253 aa14.09□□□□□ -0.15
SSPN-201ENST00000242729 ARFGEF3Q5TH69 2177 aa14.09□□□□□ -0.15
SSPN-201ENST00000242729 FGF7P21781 194 aa14.09□□□□□ -0.15
SSPN-201ENST00000242729 TRIP6Q15654 476 aaKnown RBP14.09□□□□□ -0.15
SSPN-201ENST00000242729 WDR82Q6UXN9 313 aa14.09□□□□□ -0.15
SSPN-201ENST00000242729 ZNF645Q8N7E2 425 aa14.09□□□□□ -0.15
SSPN-201ENST00000242729 OR2Z1Q8NG97 314 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms