RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CLN8Q9UBY8 286 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 MPC1Q9Y5U8 109 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 SIRPB1O00241 398 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 RAMP3O60896 148 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 IL3RAP26951 378 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 FOLR3P41439 243 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 SRYQ05066 204 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 TFF3Q07654 80 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 IFI44Q8TCB0 444 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 PKIBQ9C010 78 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 FREM2Q5SZK8 3169 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 ESPL1Q14674 2120 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 KRASP01116 189 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 COX5AP20674 150 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 LCN2P80188 198 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 KCNIP4Q6PIL6 250 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 FIP1L1Q6UN15 594 aaKnown RBP13.06□□□□□ -0.32
DDX55-201ENST00000238146 MRPS18CQ9Y3D5 142 aaKnown RBP13.06□□□□□ -0.32
DDX55-201ENST00000238146 CA6P23280 308 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 G6PCP35575 357 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 RPL15P61313 204 aaKnown RBP13.06□□□□□ -0.32
DDX55-201ENST00000238146 RPS16P62249 146 aaKnown RBP13.06□□□□□ -0.32
DDX55-201ENST00000238146 FAM78BQ5VT40 261 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 NPCDR1Q9BY65 106 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 OR51B6Q9H340 312 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 ZNF576Q9H609 170 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 FRYLO94915 3013 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 C11orf94C9JXX5 98 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 MLNRO43193 412 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 OR2H2O95918 312 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 OR1L1Q8NH94 360 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 FKBP11Q9NYL4 201 aa13.06□□□□□ -0.32
DDX55-201ENST00000238146 K7ESF4 209 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 P0C879 139 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 WNT5AP41221 380 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 ERVFC1-1P60608 527 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 LINC01551Q86U37 167 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 OR10P1Q8NGE3 313 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 CBLN4Q9NTU7 201 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 AURKAIP1Q9NWT8 199 aaPredicted RBP13.05□□□□□ -0.32
DDX55-201ENST00000238146 ODAMA1E959 279 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 LRRC30A6NM36 301 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 RNF212BA8MTL3 300 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 J3QT63 122 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 SCGB1D1O95968 90 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 PDGFBP01127 241 aaPredicted RBP13.05□□□□□ -0.32
DDX55-201ENST00000238146 EGR1P18146 543 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 TMEM256Q8N2U0 113 aa13.05□□□□□ -0.32
DDX55-201ENST00000238146 MBNL3Q9NUK0 354 aaKnown RBP13.05□□□□□ -0.32
DDX55-201ENST00000238146 DOCK11Q5JSL3 2073 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 MED12LQ86YW9 2145 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 A0A1B0GUS0 222 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 ZG16O60844 167 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 SYNGR4O95473 234 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 ARR3P36575 388 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 MPLP40238 635 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 RPL30P62888 115 aaKnown RBP13.04□□□□□ -0.32
DDX55-201ENST00000238146 MSMO1Q15800 293 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 C1orf194Q5T5A4 169 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 TMEM144Q7Z5S9 345 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 PPP1R32Q7Z5V6 425 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 POLR3KQ9Y2Y1 108 aaPredicted RBP13.04□□□□□ -0.32
DDX55-201ENST00000238146 R4GN57 208 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 USF3Q68DE3 2245 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 A0A0U1RQK1 487 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 ZNF320A2RRD8 509 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 NUPR1O60356 82 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 OTX2P32243 289 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 ZNF816Q0VGE8 651 aaPredicted RBP13.04□□□□□ -0.32
DDX55-201ENST00000238146 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.04□□□□□ -0.32
DDX55-201ENST00000238146 TRAPPC1Q9Y5R8 145 aa13.04□□□□□ -0.32
DDX55-201ENST00000238146 CASP6P55212 293 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 GNB1P62873 340 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 PLP2Q04941 152 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 LYSMD4Q5XG99 296 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 ZNF709Q8N972 641 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 DTD1Q8TEA8 209 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 C5orf30Q96GV9 206 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 WIPI2Q9Y4P8 454 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 DOCK7Q96N67 2140 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 CRYAAP02489 173 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 IGFBP4P22692 258 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 CYB561P49447 251 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 LHX2P50458 406 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 VWC2Q2TAL6 325 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 WDR86Q86TI4 376 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 WDYHV1Q96HA8 205 aa13.03□□□□□ -0.32
DDX55-201ENST00000238146 KIR2DL5BA0A0G2JN68 375 aa13.02□□□□□ -0.32
DDX55-201ENST00000238146 KIR2DL5BA0A0G2JPC4 375 aa13.02□□□□□ -0.32
DDX55-201ENST00000238146 M0R143 59 aa13.02□□□□□ -0.32
DDX55-201ENST00000238146 TMPRSS2O15393 492 aa13.02□□□□□ -0.32
DDX55-201ENST00000238146 S1PR2O95136 353 aa13.02□□□□□ -0.32
DDX55-201ENST00000238146 CELA3AP09093 270 aa13.02□□□□□ -0.32
DDX55-201ENST00000238146 CD99P14209 185 aa13.02□□□□□ -0.32
DDX55-201ENST00000238146 BMP5P22003 454 aa13.02□□□□□ -0.32
DDX55-201ENST00000238146 CXCL12P48061 93 aa13.02□□□□□ -0.32
DDX55-201ENST00000238146 CDC34P49427 236 aaPredicted RBP13.02□□□□□ -0.32
DDX55-201ENST00000238146 BRWD1-AS2P59051 145 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms