RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 ABHD3Q8WU67 409 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 OR5P3Q8WZ94 311 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 A0A0U1RQK1 487 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 A0A1B0GUS0 222 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 ZNF320A2RRD8 509 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 C5orf49A4QMS7 147 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 IGHV3-9P01782 118 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 P0C879 139 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 SFTPCP11686 197 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 CCL2P13500 99 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 GCH1P30793 250 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 BTNL3Q6UXE8 466 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 DRAM1Q8N682 238 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 APOBEC3DQ96AK3 386 aaPredicted RBP11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 TMEM45BQ96B21 275 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 NPCDR1Q9BY65 106 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 KCNS2Q9ULS6 477 aa11.8□□□□□ -0.52
SCNN1A-201ENST00000228916 SOX15O60248 233 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 YPEL1O60688 119 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 WDR1O75083 606 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 RFPL3SP0C7P2 107 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 UBE2NP61088 152 aaKnown RBP11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 CYB5R2Q6BCY4 276 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 ZNF573Q86YE8 665 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 ZCCHC14Q8WYQ9 949 aaKnown RBP11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 YPEL2Q96QA6 119 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 PRRG4Q9BZD6 226 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 MARCH11A6NNE9 402 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 HPRT1P00492 218 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 IGFBP4P22692 258 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 SOX8P57073 446 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 ARF1P84077 181 aaKnown RBP11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 TFF3Q07654 80 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 VWC2Q2TAL6 325 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 Q6P435 159 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 TMEM208Q9BTX3 173 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 DUSP23Q9BVJ7 150 aa11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 RBM7Q9Y580 266 aaKnown RBP11.79□□□□□ -0.52
SCNN1A-201ENST00000228916 TRAV39A0A0B4J263 110 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 DLEU1O43261 78 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 MPLP40238 635 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 WNT5AP41221 380 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 RPL29P47914 159 aaKnown RBP11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 GNB1P62873 340 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 PMP22Q01453 160 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 GAGE1Q13065 139 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 OR5T1Q8NG75 326 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 SGCZQ96LD1 299 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 TBX15Q96SF7 602 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 PDE6DO43924 150 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 MYPOPQ86VE0 399 aaPredicted RBP11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 AGBL5Q8NDL9 886 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 SAP25Q8TEE9 199 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 DIRC2Q96SL1 478 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 C20orf144Q9BQM9 153 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 ELOVL5Q9NYP7 299 aa11.78□□□□□ -0.52
SCNN1A-201ENST00000228916 A0A1W2PR80 420 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 RNF212BA8MTL3 300 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 NGFP01138 241 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 RPLP1P05386 114 aaKnown RBP11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 OR3A1P47881 315 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 TMEM249Q2WGJ8 235 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 ZNF497Q6ZNH5 498 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 PRR18Q8N4B5 295 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 OR10P1Q8NGE3 313 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 OR1L1Q8NH94 360 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 CLN8Q9UBY8 286 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 MRPS17Q9Y2R5 130 aaKnown RBP11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 FREM1Q5H8C1 2179 aa11.77□□□□□ -0.52
SCNN1A-201ENST00000228916 OR5B21A6NL26 309 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 SYNGR4O95473 234 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 CRYABP02511 175 aaKnown RBP11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 SERPINA7P05543 415 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 YPEL3P61236 119 aaPredicted RBP11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 GNG3P63215 75 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 HLA-BQ31612 363 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 NUFIP2Q7Z417 695 aaKnown RBP11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 SPEM1Q8N4L4 309 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 LINC00470Q9BZP3 86 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 PKIBQ9C010 78 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 TMEM106BQ9NUM4 274 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 A0A096LPE4 126 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 A0A1W2PPZ6 126 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 ZNF503-AS2A6NEH8 195 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 LRRC30A6NM36 301 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 ZNF705FA8MVS1 300 aaPredicted RBP11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 ZNF705DP0CH99 300 aaPredicted RBP11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 ZNF705BP0CI00 300 aaPredicted RBP11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 CDC34P49427 236 aaPredicted RBP11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 MSMO1Q15800 293 aa11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 WIPI1Q5MNZ9 446 aaPredicted RBP11.77□□□□□ -0.53
SCNN1A-201ENST00000228916 K7ESF4 209 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 TNFSF13O75888 250 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 P04436 131 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 C1QTNF9P0C862 333 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 DEFA4P12838 97 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 CCL4P13236 92 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 SELENOTP62341 195 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 TEX43Q6ZNM6 134 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms