RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 LRP5LA4QPB2 252 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A10PA6NDY2 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A18PA6NE21 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A16PA6NEW6 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A20PA6NIJ5 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A8PA6NJQ4 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A7PA6NKC0 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A22PA8MWA6 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A12PA8MX19 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A5PA8MXJ8 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A23PA8MXZ1 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 CBR3O75828 277 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 SERF1AO75920 110 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 IGKV1-39P01597 117 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 IGKV1D-39P04432 117 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A15PP0C7V4 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A13PP0C7W8 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A14PP0C7W9 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 FAM90A24PP0C7X0 464 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 CCL2P13500 99 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 PTTG1IPP53801 180 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 TRA2AQ13595 282 aaKnown RBP eCLIP12.08□□□□□ -0.48
SHPK-201ENST00000225519 TMEM204Q9BSN7 226 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 GPR35Q9HC97 309 aa12.08□□□□□ -0.48
SHPK-201ENST00000225519 CDKN1AP38936 164 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 RPL15P61313 204 aaKnown RBP12.07□□□□□ -0.48
SHPK-201ENST00000225519 TFF3Q07654 80 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 SPINK9Q5DT21 86 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 FGFBP3Q8TAT2 258 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 DERL1Q9BUN8 251 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 ZNF586Q9NXT0 402 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 TRAPPC2LQ9UL33 140 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 TIMM9Q9Y5J7 89 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 ATG2AQ2TAZ0 1938 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 C17orf112F2Z3M2 114 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 ATP5G3P48201 142 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 SUMO1P63165 101 aaKnown RBP12.07□□□□□ -0.48
SHPK-201ENST00000225519 Q6ZS49 121 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 PPIAL4AQ9Y536 164 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 C3orf80F5H4A9 247 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 AQP7O14520 342 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 SYNGR1O43759 233 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 UMODP07911 640 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 HYAL1Q12794 435 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 ZNF324BQ6AW86 544 aaPredicted RBP12.07□□□□□ -0.48
SHPK-201ENST00000225519 C20orf204Q6ZNR8 217 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 YRDCQ86U90 279 aaKnown RBP12.07□□□□□ -0.48
SHPK-201ENST00000225519 FADS6Q8N9I5 356 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 SRXN1Q9BYN0 137 aa12.07□□□□□ -0.48
SHPK-201ENST00000225519 FCN1O00602 326 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 TIAF1O95411 115 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 SYNGR4O95473 234 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 CD27P26842 260 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 CARD18P57730 90 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 ZNF816Q0VGE8 651 aaPredicted RBP12.06□□□□□ -0.48
SHPK-201ENST00000225519 PCSK4Q6UW60 755 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 RABEPKQ7Z6M1 372 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 FGFRL1Q8N441 504 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 OR10G8Q8NGN5 311 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 SFRP2Q96HF1 295 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 MTCH1Q9NZJ7 389 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 APC2O95996 2303 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 PIAS2O75928 621 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 CELA2AP08217 269 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 UBE2NP61088 152 aaKnown RBP12.06□□□□□ -0.48
SHPK-201ENST00000225519 COTL1Q14019 142 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 CPT1CQ8TCG5 803 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 PDE6DO43924 150 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 CXCL13O43927 109 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 CCL3P10147 92 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 EDDM3BP56851 147 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 MMDQ15546 238 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 MRPL18Q9H0U6 180 aaKnown RBP12.06□□□□□ -0.48
SHPK-201ENST00000225519 ASCL3Q9NQ33 180 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 RARRES3Q9UL19 164 aa12.06□□□□□ -0.48
SHPK-201ENST00000225519 GNB1P62873 340 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 ATP6V1FQ16864 119 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 MRPL52Q86TS9 123 aaKnown RBP12.05□□□□□ -0.48
SHPK-201ENST00000225519 CARFQ8N187 725 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 ELOVL5Q9NYP7 299 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 WIPI2Q9Y4P8 454 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 CHCHD2Q9Y6H1 151 aaPredicted RBP12.05□□□□□ -0.48
SHPK-201ENST00000225519 SPEGQ15772 3267 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 TRAV38-1A0A0B4J264 116 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 LNP1A1A4G5 178 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 DIRC3C9JPN6 131 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 DEGS1O15121 323 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 HNRNPA3P51991 378 aaKnown RBP12.05□□□□□ -0.48
SHPK-201ENST00000225519 DSCR4P56555 118 aaPredicted RBP12.05□□□□□ -0.48
SHPK-201ENST00000225519 HTD2P86397 168 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 Q6ZN92 141 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 ZNF808Q8N4W9 903 aaPredicted RBP12.05□□□□□ -0.48
SHPK-201ENST00000225519 ZFP30Q9Y2G7 519 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 A0A096LPE4 126 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 A0A1W2PPZ6 126 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 GJE1A6NN92 205 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 NPPCP23582 126 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 IER3P46695 156 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 ZXDAP98168 799 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 TPTE2P1Q5T6R2 138 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms