RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 GPHA2Q96T91 129 aa15.38■□□□□ 0.05
EXTL3-201ENST00000220562 GCM2O75603 506 aaPredicted RBP15.38■□□□□ 0.05
EXTL3-201ENST00000220562 MIC13Q5XKP0 118 aa15.38■□□□□ 0.05
EXTL3-201ENST00000220562 CISD1Q9NZ45 108 aaKnown RBP15.38■□□□□ 0.05
EXTL3-201ENST00000220562 ZNF273Q14593 569 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.37■□□□□ 0.05
EXTL3-201ENST00000220562 HOXD4P09016 255 aaPredicted RBP15.37■□□□□ 0.05
EXTL3-201ENST00000220562 PF4V1P10720 104 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 UCNP55089 124 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 FGF11Q92914 225 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 CTSBP07858 339 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 SSTR5P35346 364 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 GFRA1P56159 465 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 RELBQ01201 579 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 HSPB7Q9UBY9 170 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 OR2A4O95047 310 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 SYT8Q8NBV8 401 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 PGLYRP4Q96LB8 373 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 OR2A7Q96R45 310 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 TUBD1Q9UJT1 453 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 C1QL1O75973 258 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 LEAP2Q969E1 77 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 DLL3Q9NYJ7 618 aa15.37■□□□□ 0.05
EXTL3-201ENST00000220562 UBR3Q6ZT12 1888 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 IGKV3D-15A0A087WSY6 115 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 KBTBD11O94819 623 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 IGKV3-15P01624 115 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 COX6B1P14854 86 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 FGFRL1Q8N441 504 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 TRBV5-7A0A0A0MS05 114 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 A8MWL6 223 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 ZNF324O75467 553 aaPredicted RBP15.36■□□□□ 0.05
EXTL3-201ENST00000220562 SHISA5Q8N114 240 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 RAB37Q96AX2 223 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 PGPA6NDG6 321 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 ATXN7O15265 892 aaPredicted RBP15.36■□□□□ 0.05
EXTL3-201ENST00000220562 MPDU1O75352 247 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 COX6A1P12074 109 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 CD81P60033 236 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 SMDT1Q9H4I9 107 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 CALYQ9NYX4 217 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 UNQ5815/PRO19632Q6UWF5 114 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 RARRES2Q99969 163 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 PRDM14Q9GZV8 571 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 COL4A1P02462 1669 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 SLC25A38Q96DW6 304 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 HSPB9Q9BQS6 159 aa15.36■□□□□ 0.05
EXTL3-201ENST00000220562 FCGR2BP31994 310 aaPredicted RBP15.35■□□□□ 0.05
EXTL3-201ENST00000220562 CDCP2Q5VXM1 449 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 RTN4RQ9BZR6 473 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 COLQQ9Y215 455 aaPredicted RBP15.35■□□□□ 0.05
EXTL3-201ENST00000220562 RGPD3A6NKT7 1758 aaPredicted RBP15.35■□□□□ 0.05
EXTL3-201ENST00000220562 IGHV3OR16-12A0A075B7B8 117 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 ZNF658BQ4V348 819 aaPredicted RBP15.35■□□□□ 0.05
EXTL3-201ENST00000220562 PQLC2Q6ZP29 291 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 TAF15Q92804 592 aaKnown RBP eCLIP15.35■□□□□ 0.05
EXTL3-201ENST00000220562 ZNF430Q9H8G1 570 aaPredicted RBP15.35■□□□□ 0.05
EXTL3-201ENST00000220562 KCNE5Q9UJ90 142 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 TRPM6Q9BX84 2022 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 TRGC2P03986 189 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 REG1AP05451 166 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 CTSSP25774 331 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 UQCRFS1P47985 274 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 TMPRSS3P57727 454 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A10PA6NDY2 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A18PA6NE21 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A16PA6NEW6 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A20PA6NIJ5 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A8PA6NJQ4 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A7PA6NKC0 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A22PA8MWA6 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A12PA8MX19 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A5PA8MXJ8 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A23PA8MXZ1 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A15PP0C7V4 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A13PP0C7W8 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A14PP0C7W9 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM90A24PP0C7X0 464 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 SPATA45Q537H7 98 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 TDRD15B5MCY1 1934 aaKnown RBP15.35■□□□□ 0.05
EXTL3-201ENST00000220562 RRN3P1Q2M238 152 aa15.35■□□□□ 0.05
EXTL3-201ENST00000220562 FAM53AQ6NSI3 398 aaPredicted RBP15.35■□□□□ 0.05
EXTL3-201ENST00000220562 TGIF2-C20orf24A0A0A6YYL0 155 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 AMY1AP04745 511 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 HSPB1P04792 205 aaKnown RBP15.34■□□□□ 0.05
EXTL3-201ENST00000220562 CKS2P33552 79 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 COTL1Q14019 142 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 ZNF660Q6AZW8 331 aaPredicted RBP15.34■□□□□ 0.05
EXTL3-201ENST00000220562 WNT2BQ93097 391 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 PKIBQ9C010 78 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 G6PC2Q9NQR9 355 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 PILRBQ9UKJ0 227 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 FHL5Q5TD97 284 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 SH3BGRL3Q9H299 93 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 CDC42EP3Q9UKI2 254 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 ADAMTS7Q9UKP4 1686 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 A0A1W2PS18 150 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 SAP25Q8TEE9 199 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 H7C2G1 150 aa15.34■□□□□ 0.05
EXTL3-201ENST00000220562 NAT1P18440 290 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms