RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 A0A0G2JNJ9 132 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 MED19A0JLT2 244 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-201ENST00000054666 RAB29O14966 203 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 PTAFRP25105 342 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 NPBWR1P48145 328 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 EIF4EBP1Q13541 118 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-201ENST00000054666 TMEM88Q6PEY1 159 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 THNSL2Q86YJ6 484 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 WFDC8Q8IUA0 241 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 ZNF295-AS1Q8N0V1 137 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 CIB3Q96Q77 187 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-201ENST00000054666 DCTN5Q9BTE1 182 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 SMDT1Q9H4I9 107 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-201ENST00000054666 HSPB7Q9UBY9 170 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 Q9UFV3 132 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 FBXO7Q9Y3I1 522 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 CACNA1DQ01668 2161 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 C17orf98A8MV24 154 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 FAM157AC9JC47 383 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 GPR37O15354 613 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 YPEL1O60688 119 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 LHBP01229 141 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 IGHV1-46P01743 117 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 RBPJQ06330 500 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 DHRS7BQ6IAN0 325 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-201ENST00000054666 FAM53AQ6NSI3 398 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-201ENST00000054666 CBLN2Q8IUK8 224 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 ZNRF1Q8ND25 227 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 YPEL2Q96QA6 119 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 SCNM1Q9BWG6 230 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 RBKSQ9H477 322 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 CALYQ9NYX4 217 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 KIAA1456Q9P272 454 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 PRRC2CQ9Y520 2896 aaKnown RBP6.88□□□□□ -1.31
VAMP3-201ENST00000054666 TRGV10A0A0A0MS01 117 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 A0A1B0GW64 132 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 LRRC30A6NM36 301 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 MARCH11A6NNE9 402 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 F2RL2O00254 374 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 RAB7AP51149 207 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 ERVK-16P61578 105 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 SLC38A11Q08AI6 406 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 TBR1Q16650 682 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 CR1LQ2VPA4 569 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 MORN2Q502X0 79 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 AKIRIN2Q53H80 203 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 SPRNQ5BIV9 151 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 ZNF525Q8N782 197 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 RBMXL1Q96E39 390 aaKnown RBP6.88□□□□□ -1.31
VAMP3-201ENST00000054666 PSMG3Q9BT73 122 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-201ENST00000054666 SLC35B3Q9H1N7 401 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 NCOR1P1Q9H4R4 102 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 UNKLQ9H9P5 680 aaKnown RBP6.88□□□□□ -1.31
VAMP3-201ENST00000054666 GCM1Q9NP62 436 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 NDRG3Q9UGV2 375 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 PRELID3BQ9Y3B1 194 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 CUL9Q8IWT3 2517 aa6.88□□□□□ -1.31
VAMP3-201ENST00000054666 ACACAQ13085 2346 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 UBE2L5PA0A1B0GUS4 154 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 NKX6-3A6NJ46 265 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 LINC00473A8K010 186 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 CEBPZOSA8MTT3 80 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 C9JQL5 133 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 H7C2Y5 167 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 K7ENP7 123 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 M0R1X1 148 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 SCAF4O95104 1147 aaKnown RBP6.87□□□□□ -1.31
VAMP3-201ENST00000054666 OR8U8P0C7N1 319 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 P0C879 139 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 TNFRSF1AP19438 455 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 KIR2DS2P43631 304 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 STUMQ69YW2 141 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 OR8G2PQ6IF36 304 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 Q8NA96 180 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 Q8TCH9 128 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 DTD1Q8TEA8 209 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 FAM222BQ8WU58 562 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 SFT2D1Q8WV19 159 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 R3HDM4Q96D70 268 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 CLCC1Q96S66 551 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 DIRC2Q96SL1 478 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 AGMATQ9BSE5 352 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 PARD6GQ9BYG4 376 aaPredicted RBP6.87□□□□□ -1.31
VAMP3-201ENST00000054666 ZNF665Q9H7R5 613 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 USF3Q68DE3 2245 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 PTPRZ1P23471 2315 aaPredicted RBP6.87□□□□□ -1.31
VAMP3-201ENST00000054666 FRYQ5TBA9 3013 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 APC2O95996 2303 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 ZGRF1Q86YA3 2104 aa6.87□□□□□ -1.31
VAMP3-201ENST00000054666 RBFOX3A6NFN3 312 aa6.86□□□□□ -1.31
VAMP3-201ENST00000054666 VSTM5A8MXK1 200 aa6.86□□□□□ -1.31
VAMP3-201ENST00000054666 M0R036 132 aa6.86□□□□□ -1.31
VAMP3-201ENST00000054666 FCGR3BO75015 233 aa6.86□□□□□ -1.31
VAMP3-201ENST00000054666 LY86O95711 162 aa6.86□□□□□ -1.31
VAMP3-201ENST00000054666 CYB5R3P00387 301 aaPredicted RBP6.86□□□□□ -1.31
VAMP3-201ENST00000054666 HPRT1P00492 218 aa6.86□□□□□ -1.31
VAMP3-201ENST00000054666 DUTP33316 252 aaKnown RBP6.86□□□□□ -1.31
VAMP3-201ENST00000054666 LRRC75BQ2VPJ9 315 aa6.86□□□□□ -1.31
VAMP3-201ENST00000054666 FAM201AQ5SY85 155 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms