RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 USF3Q68DE3 2245 aa11.06□□□□□ -0.64
CTNS-201ENST00000046640 Q3ZCU0 254 aa11.06□□□□□ -0.64
CTNS-201ENST00000046640 PIP4P1Q86T03 277 aa11.06□□□□□ -0.64
CTNS-201ENST00000046640 C1QL4Q86Z23 238 aa11.06□□□□□ -0.64
CTNS-201ENST00000046640 OR5T1Q8NG75 326 aa11.06□□□□□ -0.64
CTNS-201ENST00000046640 RFESDQ8TAC1 157 aa11.06□□□□□ -0.64
CTNS-201ENST00000046640 A0A1B0GW64 132 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 H0Y980 276 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 SH2D1BO14796 132 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 ST8SIA5O15466 376 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 TIMM8AO60220 97 aaPredicted RBP11.05□□□□□ -0.64
CTNS-201ENST00000046640 IGKV1-39P01597 117 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 IGKV1D-39P04432 117 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 HSPB1P04792 205 aaKnown RBP11.05□□□□□ -0.64
CTNS-201ENST00000046640 CD55P08174 381 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 OR3A1P47881 315 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 C14orf144Q96I85 54 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 TAAR6Q96RI8 345 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 METRNQ9UJH8 293 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 POLDIP2Q9Y2S7 368 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 RNF115Q9Y4L5 304 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 IGHV3-43A0A0B4J1X8 118 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 DEFB108AA8MXU0 73 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 HAND1O96004 215 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 IGHV3-43DP0DP04 118 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 S100GP29377 79 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 GAMTQ14353 236 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 UNQ6494/PRO21346Q6UXR6 183 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 ZNF497Q6ZNH5 498 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 DMRTC2Q8IXT2 367 aaPredicted RBP11.05□□□□□ -0.64
CTNS-201ENST00000046640 ZNF295-AS1Q8N0V1 137 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 WDR31Q8NA23 367 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 OR52L2PQ8NGH6 319 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 GTF3AQ92664 365 aaKnown RBP11.05□□□□□ -0.64
CTNS-201ENST00000046640 MEGF10Q96KG7 1140 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 PSENENQ9NZ42 101 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 DUSP13Q9UII6 198 aa11.05□□□□□ -0.64
CTNS-201ENST00000046640 LOC102723971A0A1B0GUV8 181 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 IGHV3-13P01766 116 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 IGHV3-7P01780 117 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 CECR9P0C854 216 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 RAC2P15153 192 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 ERVK11-1P61568 191 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 ADIRFQ15847 76 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 Q6ZR03 302 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 RPRMLQ8N4K4 120 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 OR5D13Q8NGL4 314 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 MRGPRDQ8TDS7 321 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 DCTN5Q9BTE1 182 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 BTBD17A6NE02 478 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 BMP5P22003 454 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 GABRA2P47869 451 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 SRSF7Q16629 238 aaKnown RBP eCLIP11.04□□□□□ -0.64
CTNS-201ENST00000046640 BTNL3Q6UXE8 466 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 SSX9Q7RTT3 188 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 LINC00596Q86U02 117 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 POM121Q96HA1 1249 aa11.04□□□□□ -0.64
CTNS-201ENST00000046640 TRAV17A0A0B4J275 112 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 HBE1P02100 147 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 DEFA4P12838 97 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 FAM90A2PQ658T7 463 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 VHLLQ6RSH7 139 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 RPUSD4Q96CM3 377 aaKnown RBP11.03□□□□□ -0.64
CTNS-201ENST00000046640 RBMXL1Q96E39 390 aaKnown RBP11.03□□□□□ -0.64
CTNS-201ENST00000046640 PRDM13Q9H4Q3 707 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 PCNX1Q96RV3 2341 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 ADGRG4Q8IZF6 3080 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 UBE2L5PA0A1B0GUS4 154 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 GALR2O43603 387 aaPredicted RBP11.03□□□□□ -0.64
CTNS-201ENST00000046640 IGHG3P01860 377 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 MAS1LP35410 378 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 BAXQ07812 192 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 INO80CQ6PI98 192 aaPredicted RBP11.03□□□□□ -0.64
CTNS-201ENST00000046640 HIST3H2BBQ8N257 126 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 CABLES2Q9BTV7 478 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 SMDT1Q9H4I9 107 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 GAB2Q9UQC2 676 aa11.03□□□□□ -0.64
CTNS-201ENST00000046640 IQCF6A8MYZ5 107 aa11.02□□□□□ -0.64
CTNS-201ENST00000046640 RAMP3O60896 148 aa11.02□□□□□ -0.64
CTNS-201ENST00000046640 PTBP3O95758 552 aaKnown RBP11.02□□□□□ -0.64
CTNS-201ENST00000046640 IGKV1-5P01602 117 aa11.02□□□□□ -0.64
CTNS-201ENST00000046640 ZNF816Q0VGE8 651 aaPredicted RBP11.02□□□□□ -0.64
CTNS-201ENST00000046640 EDDM3AQ14507 147 aa11.02□□□□□ -0.64
CTNS-201ENST00000046640 SPINK9Q5DT21 86 aa11.02□□□□□ -0.64
CTNS-201ENST00000046640 C11orf53Q8IXP5 236 aa11.02□□□□□ -0.64
CTNS-201ENST00000046640 C1orf87Q8N0U7 546 aa11.02□□□□□ -0.64
CTNS-201ENST00000046640 DRAM1Q8N682 238 aa11.02□□□□□ -0.64
CTNS-201ENST00000046640 RBKSQ9H477 322 aa11.02□□□□□ -0.64
CTNS-201ENST00000046640 ACACAQ13085 2346 aa11.02□□□□□ -0.64
CTNS-201ENST00000046640 KRASP01116 189 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 BCL2P10415 239 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 IL2RGP31785 369 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 SSTR5P35346 364 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 ZNF585BQ52M93 769 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 LRP11Q86VZ4 500 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 SNIP1Q8TAD8 396 aaKnown RBP11.02□□□□□ -0.65
CTNS-201ENST00000046640 RCC1LQ96I51 464 aaKnown RBP11.02□□□□□ -0.65
CTNS-201ENST00000046640 OR2D2Q9H210 308 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 GFOD1Q9NXC2 390 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms