RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Stk17bQ8BG48 372 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Vash1Q8C1W1 375 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Acer1Q8R4X1 273 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Eif1bQ9CXU9 113 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Tceal8Q9CZY2 117 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Tstd3Q9D0B5 157 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Fstl3Q9EQC7 256 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Sdf2l1Q9ESP1 221 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Gng13Q9JMF3 67 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Ifna1P01572 189 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Egr3P43300 387 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Slc39a7Q31125 476 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm26558Q8BLW8 286 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Rnf122Q8BP31 155 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Nhlrc3Q8CCH2 347 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 GhsrQ99P50 364 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm36864A0A1Y7VJE6 447 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Jsrp1Q3MI48 332 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Trav5d-4Q5R1F6 114 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr275Q7TS18 319 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 NelfaQ8BG30 530 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 DnlzQ9D113 177 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Ube2v2Q9D2M8 145 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Ndufa7Q9Z1P6 113 aaKnown RBP14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Ctxnd2A0A1B0GQX3 59 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Ube2dnl2A2AFH2 155 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Slc25a4P48962 298 aaKnown RBP14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Otx2P80206 289 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Sdr39u1Q5M8N4 308 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Calm5Q6W3E0 140 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr180Q7TS48 317 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 UmodQ91X17 642 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Wdr77Q99J09 342 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr155Q9QZ22 319 aa14.23□□□□□ -0.13
Shh-201ENSMUST00000002708 Zdhhc22A0PK84 263 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Itgb2P11835 771 aaKnown RBP14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr524Q7TRU0 318 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr1201Q8VGF5 307 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Xcr1Q9R0M1 322 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Ccr9Q9WUT7 369 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Aadacl4B1AVU5 407 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm2075J3QMW5 144 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Bcl6bO88282 474 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Csf3P09920 208 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Tdpoz1P0DMR5 365 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 PtgfrP43117 366 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Rac1P63001 192 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Eif5aP63242 154 aaKnown RBP14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 BaxQ07813 192 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Shisa6Q3UH99 525 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 BB287469Q3UT53 144 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Clpsl2Q3UW21 102 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Fbll1Q80WS3 314 aaKnown RBP14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Prrg4Q8BGN6 226 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr1270Q8VGP3 304 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Rps21Q9CQR2 83 aaKnown RBP14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Tmem50aQ9CXL1 157 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Cldn15Q9Z0S5 227 aa14.22□□□□□ -0.13
Shh-201ENSMUST00000002708 Zfp982A2A8Q4 368 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Vmn2r83E9Q0G7 864 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm37240E9QAY5 252 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 C3ar1O09047 477 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 P2rx6O54803 389 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 F13bQ07968 669 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 6430531B16RikQ3V2J1 307 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Nxph2Q61199 261 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 NppcQ61839 126 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Cstl1Q80Y72 140 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Cd200r5Q8BTP3 270 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm5111Q8C9M4 190 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Vmn1r178Q8R2B6 304 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr480Q8VEZ0 312 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr508Q8VG42 310 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Washc3Q9CR27 194 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Nol3Q9D1X0 220 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Npas3Q9QZQ0 925 aa14.21□□□□□ -0.13
Shh-201ENSMUST00000002708 Pm20d2A3KG59 431 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 A630073D07RikE9PWS6 100 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 Scd2P13011 358 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 GbaP17439 515 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 Mdga2P60755 949 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 Hist1h3aP68433 136 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 Hist1h3bP84228 136 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 Gm13757Q7TR17 305 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 A930004D18RikQ8C8W7 157 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr52Q8VFL0 319 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 Defb7Q91V70 71 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 Glo1Q9CPU0 184 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 GrinaQ9ESF4 345 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 HcstQ9QUJ0 79 aa14.21□□□□□ -0.14
Shh-201ENSMUST00000002708 Dgat2l6A2ADU8 337 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 P01881 257 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 ApodP51910 189 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 UqcrhP99028 89 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Tex30Q3TUU5 225 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Nr2c2apQ3TV70 140 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Vmn1r183Q8K3N5 305 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Mrps18cQ8R2L5 143 aaKnown RBP14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Olfr916Q8VG53 310 aa14.2□□□□□ -0.14
Shh-201ENSMUST00000002708 Q8WUR0 141 aa14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms