RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NPIPB11E5RHQ5 1161 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 S100A2P29034 98 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 CLN3Q13286 438 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 ZNF497Q6ZNH5 498 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 HIST3H2BBQ8N257 126 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 FGFRL1Q8N441 504 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 ZNF383Q8NA42 475 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 PKIBQ9C010 78 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 WDR61Q9GZS3 305 aaKnown RBP11.67□□□□□ -0.54
PHGDH-233ENST00000642021 RBKSQ9H477 322 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 MED13Q9UHV7 2174 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 GPR179Q6PRD1 2367 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 CEBPZOSA8MTT3 80 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 B4DEV8 164 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 PHOX2AO14813 284 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 HMGB3O15347 200 aaKnown RBP11.67□□□□□ -0.54
PHGDH-233ENST00000642021 CD55P08174 381 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 WNT2P09544 360 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 CEACAM6P40199 344 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 ALKBH6Q3KRA9 238 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 MDP1Q86V88 176 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 RPP25LQ8N5L8 163 aaKnown RBP11.67□□□□□ -0.54
PHGDH-233ENST00000642021 DRAM1Q8N682 238 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 PSMG3Q9BT73 122 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-233ENST00000642021 GP6Q9HCN6 339 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 FOXJ2Q9P0K8 574 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 B4GALT7Q9UBV7 327 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 A0A1W2PNU3 283 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-233ENST00000642021 CLDN34H7C241 214 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 J3QT63 122 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 CYB5R3P00387 301 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-233ENST00000642021 RND2P52198 227 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 ERVS71-1P61550 626 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 SCCPDHQ8NBX0 429 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 C14orf144Q96I85 54 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 RHOVQ96L33 236 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 RNF150Q9ULK6 438 aa11.67□□□□□ -0.54
PHGDH-233ENST00000642021 KNTC1P50748 2209 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 SEC14L6B5MCN3 397 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 CDIPTO14735 213 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 RAMP3O60896 148 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 CELA3BP08861 270 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 PGA5P0DJD9 388 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 CEBPDP49716 269 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-233ENST00000642021 RAB4BP61018 213 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 GTF3C1Q12789 2109 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 WDR25Q64LD2 544 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-233ENST00000642021 OR8G2PQ6IF36 304 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 OPA3Q9H6K4 179 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 TMEM9BQ9NQ34 198 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 UBE2L5PA0A1B0GUS4 154 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 MAP1LC3B2A6NCE7 125 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 ACP1P24666 158 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 ERVK11-1P61568 191 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 SERF2P84101 59 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 TAF15Q92804 592 aaKnown RBP eCLIP11.66□□□□□ -0.54
PHGDH-233ENST00000642021 MAP1LC3BQ9GZQ8 125 aa11.66□□□□□ -0.54
PHGDH-233ENST00000642021 OPN3Q9H1Y3 402 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-233ENST00000642021 LOC400499M0QZD8 3231 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 PPP1R2P9O14990 202 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 CD81P60033 236 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 HBG1P69891 147 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 HBG2P69892 147 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 NKX6-1P78426 367 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-233ENST00000642021 PLGLB1Q02325 96 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 PNRC1Q12796 327 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-233ENST00000642021 TMEM41BQ5BJD5 291 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 C1orf87Q8N0U7 546 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 OR13D1Q8NGV5 346 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 BCL2L2Q92843 193 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-233ENST00000642021 WDYHV1Q96HA8 205 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 PRDM13Q9H4Q3 707 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 TMEM242Q9NWH2 141 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 VAX2Q9UIW0 290 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 CACNA1DQ01668 2161 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 ARHGAP21Q5T5U3 1957 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 ZNF737O75373 536 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 MRGPRGQ86SM5 289 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 MCEMP1Q8IX19 187 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 C5orf30Q96GV9 206 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 OR2J1Q9GZK6 312 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
PHGDH-233ENST00000642021 TREM2Q9NZC2 230 aa11.65□□□□□ -0.54
PHGDH-233ENST00000642021 LAMTOR5O43504 91 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 RPS16P62249 146 aaKnown RBP11.64□□□□□ -0.55
PHGDH-233ENST00000642021 RPL30P62888 115 aaKnown RBP11.64□□□□□ -0.55
PHGDH-233ENST00000642021 SLC38A11Q08AI6 406 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 DCAF10Q5QP82 559 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 ACSM6Q6P461 480 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 UBALD2Q8IYN6 164 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 LHX4Q969G2 390 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 PRO3102Q9H379 93 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 NCOR1P1Q9H4R4 102 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 MBNL3Q9NUK0 354 aaKnown RBP11.64□□□□□ -0.55
PHGDH-233ENST00000642021 LIN7CQ9NUP9 197 aaKnown RBP11.64□□□□□ -0.55
PHGDH-233ENST00000642021 COL27A1Q8IZC6 1860 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-233ENST00000642021 PSPNO60542 156 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 CLDN1O95832 211 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 KRASP01116 189 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 FABP4P15090 132 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms