RNA–Protein interactions for RNA: ENST00000641488.1

CASC19-234, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 1,157 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-234	ENST00000641488	ABCD2	Q9UBJ2	740 aa		4.54	□□□□□ -1.68
CASC19-234	ENST00000641488	UBQLN2	Q9UHD9	624 aa		4.54	□□□□□ -1.68
CASC19-234	ENST00000641488	MRM2	Q9UI43	246 aa	Known RBP	4.54	□□□□□ -1.68
CASC19-234	ENST00000641488	SAMD4A	Q9UPU9	718 aa	Known RBP	4.54	□□□□□ -1.68
CASC19-234	ENST00000641488		R4GMQ9	66 aa		4.54	□□□□□ -1.68
CASC19-234	ENST00000641488	CCDC182	A6NF36	153 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	CTDSP2	O14595	271 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	SYT7	O43581	403 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	KDM4B	O94953	1096 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	CCNB2	O95067	398 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	CYB5A	P00167	134 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	HLA-A	P01891	365 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	RBMY1A1	P0DJD3	496 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	APELA	P0DMC3	54 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	HSD17B1	P14061	328 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	ATF1	P18846	271 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	OR3A3	P47888	321 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	RBP2	P50120	134 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	CXCR4	P61073	352 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	GINS1	Q14691	196 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	RBMS2	Q15434	407 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	ZSCAN26	Q16670	478 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	RPEL1	Q2QD12	228 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	TMEM236	Q5W0B7	351 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	RPL13AP3	Q6NVV1	102 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.53	□□□□□ -1.68
CASC19-234	ENST00000641488		Q6ZSR3	168 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	SSX6	Q7RTT6	188 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	CCDC197	Q8NCU1	140 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	OR10K1	Q8NGX5	313 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	OR10AC1	Q8NH08	325 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	C11orf45	Q8TAV5	145 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	DYNLRB2	Q8TF09	96 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	FGGY	Q96C11	551 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	TXN2	Q99757	166 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	BARHL1	Q9BZE3	327 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	NEK6	Q9HC98	313 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	PEF1	Q9UBV8	284 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	BAIAP2	Q9UQB8	552 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	ERGIC3	Q9Y282	383 aa		4.53	□□□□□ -1.68
CASC19-234	ENST00000641488	VPS13B	Q7Z7G8	4022 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	ERICH4	A6NGS2	130 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	NOTO	A8MTQ0	251 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488		H3BN98	237 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	ARPC1B	O15143	372 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	GATB	O75879	557 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	CDK2AP2	O75956	126 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	FABP3	P05413	133 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	INAFM2	P0DMQ5	153 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	HOXB6	P17509	224 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	CCL1	P22362	96 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	CALB2	P22676	271 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	SLC2A5	P22732	501 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	IL3RA	P26951	378 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	KIR2DS2	P43631	304 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	PCP4	P48539	62 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	CRIP2	P52943	208 aa	Predicted RBP	4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	MFAP2	P55001	183 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	ADARB1	P78563	741 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	IRF3	Q14653	427 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	PLGLA	Q15195	96 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	TATDN3	Q17R31	274 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	PIGY	Q3MUY2	71 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	FAHD1	Q6P587	224 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	CD200R1L	Q6Q8B3	271 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	DEGS2	Q6QHC5	323 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	SLC16A12	Q6ZSM3	486 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	ODF3L1	Q8IXM7	274 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	ZNF439	Q8NDP4	499 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	NPB	Q8NG41	125 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	OR52B4	Q8NGK2	314 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	OR1L1	Q8NH94	360 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	CNIH3	Q8TBE1	160 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	MCUR1	Q96AQ8	359 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	ABHD1	Q96SE0	405 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	TBX5	Q99593	518 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	SCRT1	Q9BWW7	348 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	YIPF3	Q9GZM5	350 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	CHST5	Q9GZS9	411 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	CST11	Q9H112	138 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	PLEKHA2	Q9HB19	425 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	ARL8B	Q9NVJ2	186 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	FAM118A	Q9NWS6	357 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	MAGEL2	Q9UJ55	1249 aa		4.52	□□□□□ -1.69
CASC19-234	ENST00000641488	TEX22	C9J3V5	150 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	PPP5D1	E7EU14	171 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	RRH	O14718	337 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	ZNF254	O75437	659 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	KRT36	O76013	467 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	NDUFA3	O95167	84 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	CA2	P00918	260 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	SERPINA3	P01011	423 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	PRH1	P02810	166 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	TMEM225B	P0DP42	221 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	FOLR2	P14207	255 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	GYPE	P15421	78 aa		4.51	□□□□□ -1.69
CASC19-234	ENST00000641488	HMGA2	P52926	109 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms