RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 PRAMEF5Q5TYX0 476 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 PRAMEF6Q5VXH4 476 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 ASCL4Q6XD76 172 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 RARRES2Q99969 163 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF319Q9P2F9 582 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 TRAPPC1Q9Y5R8 145 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 PMS2P1A4D2B8 440 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 GCGP01275 180 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 CCL2P13500 99 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 TNFRSF9Q07011 255 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 MRPL14Q6P1L8 145 aaKnown RBP4.77□□□□□ -1.65
SCN3A-210ENST00000640652 HEPN1Q6WQI6 88 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 SIGLECL1Q8N7X8 197 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 YIF1AO95070 293 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 VENTXO95231 258 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 CELA2AP08217 269 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 CEACAM1P13688 526 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF766Q5HY98 468 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 NCMAPQ5T1S8 102 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 TMEM183AQ8IXX5 376 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 OR5R1Q8NH85 324 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 HINT2Q9BX68 163 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 RBKSQ9H477 322 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 ZDHHC11Q9H8X9 412 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 GP6Q9HCN6 339 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 H3BMH7 237 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 K7N7A8 449 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 PGLYRP1O75594 196 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-210ENST00000640652 NAPSAO96009 420 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 OR4S2Q8NH73 311 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 SPSB4Q96A44 273 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 S1PR3Q99500 378 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 KLF2Q9Y5W3 355 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-210ENST00000640652 AGAP20933 346 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 FOXL2P58012 376 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF718Q3SXZ3 478 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 OR2B11Q5JQS5 317 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 FOXL2NBQ6ZUU3 175 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 RCC1LQ96I51 464 aaKnown RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 MARCH11A6NNE9 402 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 CD82P27701 267 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 PPP1CCP36873 323 aaKnown RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 RUNX1Q01196 453 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 CFHR1Q03591 330 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 RPEL1Q2QD12 228 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 NOL4LQ96MY1 436 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HSBP1L1C9JCN9 74 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 S100A7AQ86SG5 101 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 DOK5Q9P104 306 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 PIEZO1Q92508 2521 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 LOC102723971A0A1B0GUV8 181 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 MEX3AA1L020 520 aaKnown RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF705FA8MVS1 300 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 H0YL77 283 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST1H2BKO60814 126 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF205O95201 554 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 CLDN14O95500 239 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST1H2BJP06899 126 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF705DP0CH99 300 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF705BP0CI00 300 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST1H2BOP23527 126 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 DDTP30046 118 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST1H2BBP33778 126 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 PTGDSP41222 190 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST1H2BDP58876 126 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST1H2BCP62807 126 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST2H2BEQ16778 126 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 DNLZQ5SXM8 178 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 C16orf82Q7Z2V1 217 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 SCCPDHQ8NBX0 429 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 MRPL30Q8TCC3 161 aaKnown RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST1H2BHQ93079 126 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST1H2BNQ99877 126 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 HIST1H2BMQ99879 126 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 IGKV1-27A0A075B6S5 117 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 TRGV10A0A0A0MS01 117 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 MASP2O00187 686 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 IGLV3-1P01715 115 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 MAGEA5P43359 124 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 EDDM3AQ14507 147 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 PDCD1Q15116 288 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 TIGITQ495A1 244 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 CXorf66Q5JRM2 361 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 DCAF10Q5QP82 559 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 KLHDC3Q9BQ90 382 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 TTTY12Q9BZ98 90 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF703Q9H7S9 590 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-210ENST00000640652 SH2D2AQ9NP31 389 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 IGKV3D-15A0A087WSY6 115 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF90Q03938 601 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 ELOBQ15370 118 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 COX19Q49B96 90 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 OR1K1Q8NGR3 316 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 REV3LO60673 3130 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 TRBV6-6A0A0A6YYG2 114 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 TRGV5A0A0B4J1U4 118 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 NPIPB11E5RHQ5 1161 aa4.76□□□□□ -1.65
SCN3A-210ENST00000640652 IL3RAP26951 378 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms