RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 EWSR1Q01844 656 aaKnown RBP eCLIP4.91□□□□□ -1.62
SCARB2-218ENST00000639715 IL13RA2Q14627 380 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 CALHM1Q8IU99 346 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 C1orf174Q8IYL3 243 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 OR1B1Q8NGR6 318 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 ZNF519Q8TB69 540 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 WFDC12Q8WWY7 111 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 IMMP2LQ96T52 175 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 CLEC1BQ9P126 229 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 GPR132Q9UNW8 380 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 KNTC1P50748 2209 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 HYPMO75409 117 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 NEURL1O76050 574 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 IGKV3-11P04433 115 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 ARR3P36575 388 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 SRP14P37108 136 aaKnown RBP4.91□□□□□ -1.62
SCARB2-218ENST00000639715 CATR1Q13166 79 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 MRGPRGQ86SM5 289 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 YRDCQ86U90 279 aaKnown RBP4.91□□□□□ -1.62
SCARB2-218ENST00000639715 HOGA1Q86XE5 327 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 OR8B12Q8NGG6 310 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 IL1F10Q8WWZ1 152 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 AMELYQ99218 206 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 MRPS18BQ9Y676 258 aaKnown RBP4.91□□□□□ -1.62
SCARB2-218ENST00000639715 H3BP45 60 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 DNPH1O43598 174 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 CXCL13O43927 109 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 IGHMP01871 453 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 GYPAP02724 150 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 HLA-DOBP13765 273 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 RND2P52198 227 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 GFRA1P56159 465 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 TFF2Q03403 129 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 VAX1Q5SQQ9 334 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 UBALD2Q8IYN6 164 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 BOD1L2Q8IYS8 172 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 PNKDQ8N490 385 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 TMEM251Q8N6I4 163 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 OR4S2Q8NH73 311 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 OR2V1Q8NHB1 315 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 FGF11Q92914 225 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 RAB37Q96AX2 223 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 VWCEQ96DN2 955 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 POM121L2Q96KW2 1035 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 GFI1Q99684 422 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 TBL2Q9Y4P3 447 aaKnown RBP4.91□□□□□ -1.62
SCARB2-218ENST00000639715 FRMPD3Q5JV73 1810 aa4.91□□□□□ -1.62
SCARB2-218ENST00000639715 LRRC3CA6NJW4 275 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 SHISA8B8ZZ34 492 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 KLRC4-KLRK1H3BQV0 150 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 TNFSF15O95150 251 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 IGLV3-19P01714 112 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 CD55P08174 381 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 IGLC2P0DOY2 106 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 IGLC3P0DOY3 106 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 PAX1P15863 534 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 IER3P46695 156 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 OR3A4PP47883 348 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 EGR4Q05215 589 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 MPV17L2Q567V2 206 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 PLAC9Q5JTB6 97 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 SLC25A34Q6PIV7 304 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 C6orf15Q6UXA7 325 aaPredicted RBP4.9□□□□□ -1.62
SCARB2-218ENST00000639715 C16orf47Q6ZP98 133 aaPredicted RBP4.9□□□□□ -1.62
SCARB2-218ENST00000639715 LRRC75AQ8NAA5 344 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 FER1L6-AS2Q96M78 137 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 KCNK17Q96T54 332 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 FOXB1Q99853 325 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 C5orf66Q9H5L9 145 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 THYN1Q9P016 225 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 A6NDN8 102 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 SNURFLB1AK76 121 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 FAM157AC9JC47 383 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 ZNF735P0CB33 412 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 AADACP22760 399 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 APOBEC3AP31941 199 aaPredicted RBP4.9□□□□□ -1.62
SCARB2-218ENST00000639715 CDKN1AP38936 164 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 RELBQ01201 579 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 ZNF260Q3ZCT1 412 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 SAXO1Q8IYX7 474 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 ZNF501Q96CX3 271 aaPredicted RBP4.9□□□□□ -1.62
SCARB2-218ENST00000639715 WDYHV1Q96HA8 205 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 GUCD1Q96NT3 240 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 RASL10BQ96S79 203 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 WDR61Q9GZS3 305 aaKnown RBP4.9□□□□□ -1.62
SCARB2-218ENST00000639715 AKIRIN1Q9H9L7 192 aaPredicted RBP4.9□□□□□ -1.62
SCARB2-218ENST00000639715 CALHM2Q9HA72 323 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 PLA2G3Q9NZ20 509 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 SS18L2Q9UHA2 77 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 TRAPPC2LQ9UL33 140 aa4.9□□□□□ -1.62
SCARB2-218ENST00000639715 ARHGEF17Q96PE2 2063 aaPredicted RBP4.9□□□□□ -1.63
SCARB2-218ENST00000639715 HEATR5AQ86XA9 2040 aa4.9□□□□□ -1.63
SCARB2-218ENST00000639715 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.9□□□□□ -1.63
SCARB2-218ENST00000639715 K7N7A8 449 aa4.9□□□□□ -1.63
SCARB2-218ENST00000639715 BMPR1BO00238 502 aa4.9□□□□□ -1.63
SCARB2-218ENST00000639715 RAMP3O60896 148 aa4.9□□□□□ -1.63
SCARB2-218ENST00000639715 LINC00271P0C7V0 271 aa4.9□□□□□ -1.63
SCARB2-218ENST00000639715 PF4V1P10720 104 aa4.9□□□□□ -1.63
SCARB2-218ENST00000639715 CD1BP29016 333 aa4.9□□□□□ -1.63
SCARB2-218ENST00000639715 DYNLT3P51808 116 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms