RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	ZFAND3	Q9H8U3	227 aa		5.72	□□□□□ -1.49
CACNA1A-222	ENST00000636022	KCNIP1	Q9NZI2	227 aa		5.72	□□□□□ -1.49
CACNA1A-222	ENST00000636022	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.72	□□□□□ -1.49
CACNA1A-222	ENST00000636022	JPT1	Q9UK76	154 aa		5.72	□□□□□ -1.49
CACNA1A-222	ENST00000636022	ERGIC3	Q9Y282	383 aa		5.72	□□□□□ -1.49
CACNA1A-222	ENST00000636022	YPEL1	O60688	119 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NAPSA	O96009	420 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CDK1	P06493	297 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SLC2A2	P11168	524 aa	Predicted RBP	5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CNTFR	P26992	372 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	HTR2C	P28335	458 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	PPIF	P30405	207 aa	Known RBP	5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	OR3A3	P47888	321 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ACTB	P60709	375 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RPS27A	P62979	156 aa	Known RBP	5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	QRFP	P83859	136 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	DGCR2	P98153	550 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	DCTN2	Q13561	401 aa	Known RBP	5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	IRF3	Q14653	427 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	HMGN3	Q15651	99 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CXorf66	Q5JRM2	361 aa	Predicted RBP	5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NKAPL	Q5M9Q1	402 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ZNF880	Q6PDB4	577 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ZNF833P	Q6ZTB9	187 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SLC51B	Q86UW2	128 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	PHYHIP	Q92561	330 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	KCTD7	Q96MP8	289 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	YPEL2	Q96QA6	119 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NABP2	Q9BQ15	211 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CHCHD6	Q9BRQ6	235 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NICN1	Q9BSH3	213 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	FAAP24	Q9BTP7	215 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	MND1	Q9BWT6	205 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TM2D1	Q9BX74	207 aa		5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	MRPL20	Q9BYC9	149 aa	Known RBP	5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ZNF107	Q9UII5	783 aa	Predicted RBP	5.71	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TNC	P24821	2201 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	DNAH1	Q9P2D7	4330 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SAA2-SAA4	A0A096LPE2	208 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022		A0A0A6YYD4	124 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	IGHV7-81	A0A0B4J1V7	117 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	FOXI3	A8MTJ6	420 aa	Predicted RBP	5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NOTO	A8MTQ0	251 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TMEM14DP	A8MWL7	114 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	PTGES3L	E9PB15	166 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022		G3V318	75 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022		I3L521	148 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SLC22A1	O15245	554 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RGS11	O94810	467 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NDUFA3	O95167	84 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	IGLV1-40	P01703	118 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	HLA-DRB1	P01911	266 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	UCHL1	P09936	223 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SAA2	P0DJI9	122 aa	Predicted RBP	5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	OR5H8	P0DN80	308 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CTRB1	P17538	263 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SRM	P19623	302 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	M6PR	P20645	277 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	VDAC1	P21796	283 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	LUM	P51884	338 aa	Predicted RBP	5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RAB25	P57735	213 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RUNX1	Q01196	453 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SPHAR	Q15513	63 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	MMD	Q15546	238 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	C5orf64	Q2M2E5	130 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	C19orf54	Q5BKX5	351 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	GLT8D1	Q68CQ7	371 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CTRB2	Q6GPI1	263 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	FAM71F2	Q6NXP2	309 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	C6orf201	Q7Z4U5	140 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CEACAM19	Q7Z692	300 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SVOP	Q8N4V2	548 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	MINDY2	Q8NBR6	621 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NPB	Q8NG41	125 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	OR2AK2	Q8NG84	335 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	KCNG3	Q8TAE7	436 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	C4orf3	Q8WVX3	66 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	GALM	Q96C23	342 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	UBE2E2	Q96LR5	201 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NEDD4L	Q96PU5	975 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	GFI1	Q99684	422 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NEURL2	Q9BR09	285 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ZNF251	Q9BRH9	671 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	AIFM2	Q9BRQ8	373 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TMED9	Q9BVK6	235 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TMEM59	Q9BXS4	323 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ANKRD60	Q9BZ19	345 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	KLK15	Q9H2R5	256 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	IFI27L2	Q9H2X8	130 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	OR51J1	Q9H342	316 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	KCNK15	Q9H427	330 aa		5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	LSM4	Q9Y4Z0	139 aa	Known RBP	5.7	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TRBV6-6	A0A0A6YYG2	114 aa		5.69	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RAB29	O14966	203 aa		5.69	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ATP6V0E1	O15342	81 aa		5.69	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NBR2	O15453	112 aa		5.69	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RAMP3	O60896	148 aa		5.69	□□□□□ -1.5
CACNA1A-222	ENST00000636022	BPNT1	O95861	308 aa		5.69	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CT45A6	P0DMU7	189 aa		5.69	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CT45A5	P0DMU8	189 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms