RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ZNF16P17020 682 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 CCNOP22674 350 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 GNB2P62879 340 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 GUSBP11Q6P575 273 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 TEX38Q6PEX7 206 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 FAM58AQ8N1B3 248 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 OR1K1Q8NGR3 316 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 DUSP23Q9BVJ7 150 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 OR1A1Q9P1Q5 309 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 CBY1Q9Y3M2 126 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 P04436 131 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 PPP1CBP62140 327 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 BTNL3Q6UXE8 466 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 FGFRL1Q8N441 504 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 ZNF709Q8N972 641 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 HSPB7Q9UBY9 170 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 NAGKQ9UJ70 344 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 KCNS2Q9ULS6 477 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 TRAPPC1Q9Y5R8 145 aa12.54□□□□□ -0.4
CACNA1A-220ENST00000635988 OR5B21A6NL26 309 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 PDE6DO43924 150 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 SERPINA7P05543 415 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 TDGF1P3P51864 188 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 RPL15P61313 204 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 FFAR4Q5NUL3 377 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 ATG101Q9BSB4 218 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 C5orf49A4QMS7 147 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 TMPRSS2O15393 492 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 MLNRO43193 412 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 PAGE4O60829 102 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 SYNGR4O95473 234 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 UMODP07911 640 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 IL3RAP26951 378 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 FOXL1Q12952 345 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 OR10P1Q8NGE3 313 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 OR5P3Q8WZ94 311 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 WDYHV1Q96HA8 205 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 LINC00470Q9BZP3 86 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 CBLN4Q9NTU7 201 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 MPC1Q9Y5U8 109 aa12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 ASCC3Q8N3C0 2202 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-220ENST00000635988 C17orf112F2Z3M2 114 aa12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 LBX1P52954 281 aa12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 GNG3P63215 75 aa12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 FAM78BQ5VT40 261 aa12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 TMEM144Q7Z5S9 345 aa12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 MS4A10Q96PG2 267 aa12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 PKIBQ9C010 78 aa12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 CRIM1Q9NZV1 1036 aa12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 POLR3KQ9Y2Y1 108 aaPredicted RBP12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 PXMP4Q9Y6I8 212 aa12.52□□□□□ -0.4
CACNA1A-220ENST00000635988 TNRC6BQ9UPQ9 1833 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 A0A0U1RQK1 487 aa12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 ZNF320A2RRD8 509 aa12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 ANKRD30BLA7E2S9 258 aa12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 C11orf94C9JXX5 98 aa12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 MRPL33O75394 65 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 ARF1P84077 181 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 IL11RAQ14626 422 aa12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 AGBL5Q8NDL9 886 aa12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 ZNF552Q9H707 407 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 CHD3Q12873 2000 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-220ENST00000635988 WDR1O75083 606 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 SS18L1O75177 396 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 UBE2NP61088 152 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 TMEM249Q2WGJ8 235 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 DCAF10Q5QP82 559 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 ZBTB34Q8NCN2 500 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 CIB3Q96Q77 187 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 UBE2ZQ9H832 354 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 OCIAD1Q9NX40 245 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 MRPS18CQ9Y3D5 142 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 TNRC6AQ8NDV7 1962 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 SOX15O60248 233 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 CRYABP02511 175 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 CHRNA7P36544 502 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 DRAM1Q8N682 238 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 ABHD3Q8WU67 409 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 GATAD1Q8WUU5 269 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 NPCDR1Q9BY65 106 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 CHODLQ9H9P2 273 aa12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-220ENST00000635988 G0S2P27469 103 aa12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 NUFIP2Q7Z417 695 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 ZNF488Q96MN9 340 aa12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 F6UZH7 168 aa12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 CDC34P49427 236 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 SOX8P57073 446 aa12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 TLE1Q04724 770 aa12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 VWC2Q2TAL6 325 aa12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 ZCCHC14Q8WYQ9 949 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-220ENST00000635988 IGKV3D-15A0A087WSY6 115 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 ZNF705FA8MVS1 300 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 KLF7O75840 302 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 TRAPPC6AO75865 159 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms