RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 BSPH1Q075Z2 132 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 PYY3Q5JQD4 70 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 MYPOPQ86VE0 399 aaPredicted RBP13.09□□□□□ -0.31
CLN8-209ENST00000635970 FAM221AA4D161 298 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A10PA6NDY2 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A18PA6NE21 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A16PA6NEW6 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A20PA6NIJ5 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A8PA6NJQ4 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A7PA6NKC0 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A22PA8MWA6 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A12PA8MX19 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A5PA8MXJ8 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A23PA8MXZ1 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 M0R1B8 84 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 GPR37O15354 613 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 SCAF4O95104 1147 aaKnown RBP13.08□□□□□ -0.32
CLN8-209ENST00000635970 PPYP01298 95 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 CELA3BP08861 270 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A15PP0C7V4 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A13PP0C7W8 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A14PP0C7W9 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FAM90A24PP0C7X0 464 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 FUT6P51993 359 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 NDUFA6P56556 154 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 DLK1P80370 383 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 DMRTC1Q5HYR2 192 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 ZNF695Q8IW36 515 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 TMEM252Q8N6L7 170 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 REEP6Q96HR9 211 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 SLC7A11Q9UPY5 501 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 WSB1Q9Y6I7 421 aa13.08□□□□□ -0.32
CLN8-209ENST00000635970 HEATR1Q9H583 2144 aaKnown RBP13.08□□□□□ -0.32
CLN8-209ENST00000635970 CADP27708 2225 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 DPRXA6NFQ7 191 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 FAM24AA6NFZ4 105 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 YIF1AO95070 293 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 PLAUP00749 431 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 HIST1H1BP16401 226 aaKnown RBP13.07□□□□□ -0.32
CLN8-209ENST00000635970 AKR1C8PQ5T2L2 129 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 DPPA2Q7Z7J5 298 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 MDP1Q86V88 176 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 IL22RA2Q969J5 263 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 TP53RKQ96S44 253 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 GFOD1Q9NXC2 390 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 IGSF23A1L1A6 192 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 GEMIN2O14893 280 aaKnown RBP13.07□□□□□ -0.32
CLN8-209ENST00000635970 PPP1R2P9O14990 202 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 ANGPTL7O43827 346 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 DFFBO76075 338 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 NRASP01111 189 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 DBHP09172 617 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 CST2P09228 141 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 FUT3P21217 361 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 AADACP22760 399 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 IL24Q13007 206 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 ICAM4Q14773 271 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 SNAI3Q3KNW1 292 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 Q8WTZ3 238 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 OBP2BQ9NPH6 170 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 ST3GAL6Q9Y274 331 aa13.07□□□□□ -0.32
CLN8-209ENST00000635970 UBE2J1Q9Y385 318 aaPredicted RBP13.07□□□□□ -0.32
CLN8-209ENST00000635970 IGKV1-27A0A075B6S5 117 aa13.06□□□□□ -0.32
CLN8-209ENST00000635970 IGHV1-18A0A0C4DH31 117 aa13.06□□□□□ -0.32
CLN8-209ENST00000635970 SPRY1O43609 319 aaPredicted RBP13.06□□□□□ -0.32
CLN8-209ENST00000635970 IFNA10P01566 189 aa13.06□□□□□ -0.32
CLN8-209ENST00000635970 VDAC1P21796 283 aa13.06□□□□□ -0.32
CLN8-209ENST00000635970 IDH3GP51553 393 aaPredicted RBP13.06□□□□□ -0.32
CLN8-209ENST00000635970 NKX6-1P78426 367 aaPredicted RBP13.06□□□□□ -0.32
CLN8-209ENST00000635970 CCL20P78556 96 aa13.06□□□□□ -0.32
CLN8-209ENST00000635970 ID3Q02535 119 aa13.06□□□□□ -0.32
CLN8-209ENST00000635970 CLDND2Q8NHS1 167 aa13.06□□□□□ -0.32
CLN8-209ENST00000635970 NGBQ9NPG2 151 aa13.06□□□□□ -0.32
CLN8-209ENST00000635970 RAI1Q7Z5J4 1906 aaPredicted RBP13.06□□□□□ -0.32
CLN8-209ENST00000635970 IFITM10A6NMD0 228 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 CYSRT1A8MQ03 144 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 SYNGR3O43761 229 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 PTBP3O95758 552 aaKnown RBP13.05□□□□□ -0.32
CLN8-209ENST00000635970 IGKV3-15P01624 115 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 HLA-DRB3P79483 266 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 KRTAP27-1Q3LI81 207 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 OR5C1Q8NGR4 320 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 OR11L1Q8NGX0 322 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 OR1F12Q8NHA8 337 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 NRGNQ92686 78 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 RNF150Q9ULK6 438 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST1H2BKO60814 126 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST1H2BJP06899 126 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 CTXN2P0C2S0 81 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 CECR9P0C854 216 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST1H2BOP23527 126 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 CD40P25942 277 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 GNRHRP30968 328 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST1H2BBP33778 126 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 RBM11P57052 281 aaKnown RBP13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST1H2BDP58876 126 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 TAS2R30P59541 319 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST1H2BCP62807 126 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST2H2BEQ16778 126 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms