RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 MAPK14Q16539 360 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CEACAM16Q2WEN9 425 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 DEFB112Q30KQ8 113 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FBXL19-AS1Q494R0 122 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 YIF1BQ5BJH7 314 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SPIN3Q5JUX0 258 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 HBMQ6B0K9 141 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC48A1Q6P1K1 146 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OPN5Q6U736 354 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 METAP1DQ6UB28 335 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FBXW12Q6X9E4 464 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CYHR1Q6ZMK1 362 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 MDP1Q86V88 176 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PLCZ1Q86YW0 608 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 EGFL6Q8IUX8 553 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SGPP2Q8IWX5 399 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CMTM1Q8IZ96 169 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF101Q8IZC7 436 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FAM9CQ8IZT9 166 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 C4orf33Q8N1A6 199 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 MUC15Q8N387 334 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ZCCHC7Q8N3Z6 543 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 MS4A15Q8N5U1 240 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 MIR7-3HGQ8N6C7 128 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 KRTCAP2Q8N6L1 136 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FAM216BQ8N7L0 139 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 COX18Q8N8Q8 333 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 C15orf56Q8N910 161 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 LINC00304Q8N9R0 145 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 WDR31Q8NA23 367 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CHST4Q8NCG5 386 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 BBOF1Q8ND07 529 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF680Q8NEM1 530 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 DEFB108BQ8NET1 73 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR7G1Q8NGA0 311 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR11H7Q8NGC8 314 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR56B2PQ8NGI1 322 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR9I1Q8NGQ6 314 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR6K3Q8NGY3 331 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR2AE1Q8NHA4 323 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR2V1Q8NHB1 315 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 AKR7LQ8NHP1 331 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 KCNG3Q8TAE7 436 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR51E1Q8TCB6 317 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FAM45AQ8TCE6 357 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 GPR151Q8TDV0 419 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CASTOR1Q8WTX7 329 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ASZ1Q8WWH4 475 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ITFG2Q969R8 447 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 TMEM230Q96A57 120 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PTX4Q96A99 478 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC25A46Q96AG3 418 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC58Q96CX6 371 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC41A3Q96GZ6 507 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SNF8Q96H20 258 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 COL21A1Q96P44 957 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 IP6K3Q96PC2 410 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ALS2CR12Q96Q35 445 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 AIF1LQ9BQI0 150 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RHOXF2Q9BQY4 288 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 WFDC6Q9BQY6 131 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 MARVELD1Q9BSK0 173 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RSG1Q9BU20 258 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SFXN3Q9BWM7 321 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 BEX2Q9BXY8 128 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 TBL1XR1Q9BZK7 514 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PKIBQ9C010 78 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 FGF23Q9GZV9 251 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 STMN4Q9H169 189 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OR52D1Q9H346 318 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 C1orf198Q9H425 327 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SAV1Q9H4B6 383 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 TRABDQ9H4I3 376 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RNF122Q9H9V4 155 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CXorf21Q9HAI6 301 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 BEX1Q9HBH7 125 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 DDX18Q9NVP1 670 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RHBDL2Q9NX52 303 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 C21orf62Q9NYP8 219 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PTTG3PQ9NZH4 202 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ADA2Q9NZK5 511 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 CHMP5Q9NZZ3 219 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 OPTCQ9UBM4 332 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 MARCOQ9UEW3 520 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF230Q9UIE0 474 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 LINC00527Q9UJ94 153 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PITPNC1Q9UKF7 332 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 PCTPQ9UKL6 214 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 RPL26L1Q9UNX3 145 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 YARS2Q9Y2Z4 477 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SNX24Q9Y343 169 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 STARD10Q9Y365 291 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 MMACHCQ9Y4U1 282 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 ASB4Q9Y574 426 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC22A7Q9Y694 548 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 V9GYY5 206 aaPredicted RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 DNAH10Q8IVF4 4471 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 STAB2Q8WWQ8 2551 aa0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 DYNC1H1Q14204 4646 aaKnown RBP0.57□□□□□ -2.32
SMARCB1-209ENST00000635578 KMT2AQ03164 3969 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms