RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SCMH1Q96GD3 660 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 ZNF236Q9UL36 1845 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 CYB5R3P00387 301 aaPredicted RBP10.2□□□□□ -0.78
SHPRH-211ENST00000629427 SUCLG1P53597 346 aaKnown RBP10.2□□□□□ -0.78
SHPRH-211ENST00000629427 OR4B1Q8NGF8 309 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 MOB4Q9Y3A3 225 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 ARID2Q68CP9 1835 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 CEACAM21Q3KPI0 293 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 TMEM52Q8NDY8 209 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 ISOC2Q96AB3 205 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 POM121Q96HA1 1249 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 FOXS1O43638 330 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 CA11O75493 328 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 CD160O95971 181 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 DDA1Q9BW61 102 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 FUT9Q9Y231 359 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 M0R143 59 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 ADIPOQQ15848 244 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 OR8G5Q8NG78 346 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 FAM216AQ8WUB2 273 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 ANGPTL4Q9BY76 406 aa10.2□□□□□ -0.78
SHPRH-211ENST00000629427 P2RY6Q15077 328 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 ZNF645Q8N7E2 425 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 LOXL4Q96JB6 756 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 H7C2G1 150 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 HPRT1P00492 218 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 HIST1H1BP16401 226 aaKnown RBP10.19□□□□□ -0.78
SHPRH-211ENST00000629427 ZNF646O15015 1829 aaPredicted RBP10.19□□□□□ -0.78
SHPRH-211ENST00000629427 FAM186AA6NE01 2351 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 PTPRFP10586 1907 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 CRHP06850 196 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 MC5RP33032 325 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 MAS1LP35410 378 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 UNQ5815/PRO19632Q6UWF5 114 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 OR5AU1Q8NGC0 362 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 SNX22Q96L94 193 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 NPVFQ9HCQ7 196 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 SIAH2O43255 324 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 RNF133Q8WVZ7 376 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 TMEM189A5PLL7 270 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 TMEM229AB2RXF0 380 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 RPL24P83731 157 aaKnown RBP10.19□□□□□ -0.78
SHPRH-211ENST00000629427 AWAT1Q58HT5 328 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 SPRED2Q7Z698 418 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 MRGPRGQ86SM5 289 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 GCGP01275 180 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 TGIF1Q15583 401 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 DUX5Q96PT3 197 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 TMEM56-RWDD3S4R434 201 aa10.19□□□□□ -0.78
SHPRH-211ENST00000629427 IGHV3OR16-10A0A075B7F0 116 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 OR4C45A6NMZ5 311 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 LEUTXA8MZ59 168 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 FCGR2BP31994 310 aaPredicted RBP10.18□□□□□ -0.78
SHPRH-211ENST00000629427 CD81P60033 236 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 COL5A3P25940 1745 aaPredicted RBP10.18□□□□□ -0.78
SHPRH-211ENST00000629427 CEP290O15078 2479 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 B4DEV8 164 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 NPIPB6E9PJ23 425 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 STAG3L2P0CL84 134 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 NMUP48645 174 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 LRRC3BQ96PB8 259 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 PHLDA3Q9Y5J5 127 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 IGKV1D-16P01601 117 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 STPG3Q8N7X2 389 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 IL36RNQ9UBH0 155 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 IL19Q9UHD0 177 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 hCG_38984A0A1B0GV85 526 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 SP9P0CG40 484 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 ZNF826PQ6ZT77 177 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 RSG1Q9BU20 258 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 RNF115Q9Y4L5 304 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 ARF6P62330 175 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 PRSS8Q16651 343 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 ATG101Q9BSB4 218 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 PITPNC1Q9UKF7 332 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 TAF1LQ8IZX4 1826 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 LOC105371242A0A075B767 164 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 IGKV3OR2-268A0A0C4DH90 116 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 FGF12P61328 243 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 IGSF11Q5DX21 431 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 MIOXQ9UGB7 285 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 PILRBQ9UKJ0 227 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 PXMP4Q9Y6I8 212 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 TET1Q8NFU7 2136 aa10.18□□□□□ -0.78
SHPRH-211ENST00000629427 A0A0U1RQV5 110 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 OR2H2O95918 312 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 CXCL3P19876 107 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 PDLIM4P50479 330 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 TIMP4Q99727 224 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 VSIG8P0DPA2 414 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 RGP1Q92546 391 aaPredicted RBP10.17□□□□□ -0.78
SHPRH-211ENST00000629427 TUBA4BQ9H853 241 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 A1L4Q6 167 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 MGST3O14880 152 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 NUDT3O95989 172 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 MPV17P39210 176 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 HSF4Q9ULV5 492 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 PITX3O75364 302 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 SSTR5P35346 364 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 MEOX2P50222 304 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms