RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 C11orf54Q9H0W9 315 aaPredicted RBP11.88□□□□□ -0.51
PNKP-221ENST00000627317 MEGF9Q9H1U4 602 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 DPAGT1Q9H3H5 408 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 LY6LH3BQJ8 138 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 HSD17B6O14756 317 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 HOXA3O43365 443 aaPredicted RBP11.87□□□□□ -0.51
PNKP-221ENST00000627317 RBBP9O75884 186 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 IGHV4-59P01825 116 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 NAT1P18440 290 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 OR3A3P47888 321 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 CDK10Q15131 360 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 H1FOOQ8IZA3 346 aaPredicted RBP11.87□□□□□ -0.51
PNKP-221ENST00000627317 OR5AP2Q8NGF4 316 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 OR5H2Q8NGV7 314 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 SMIM4Q8WVI0 70 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 SSX3Q99909 188 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 IFI27L2Q9H2X8 130 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 TNFRSF19Q9NS68 423 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 EHFQ9NZC4 300 aa11.87□□□□□ -0.51
PNKP-221ENST00000627317 RBM7Q9Y580 266 aaKnown RBP11.87□□□□□ -0.51
PNKP-221ENST00000627317 CTDSPLO15194 276 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 GAPDHP04406 335 aaKnown RBP11.86□□□□□ -0.51
PNKP-221ENST00000627317 HKR1P10072 659 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 NFYAP23511 347 aaPredicted RBP11.86□□□□□ -0.51
PNKP-221ENST00000627317 HLA-DMAP28067 261 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 REG1BP48304 166 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 ZNF137PP52743 207 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 AANATQ16613 207 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 PYDC2Q56P42 97 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 CCDC190Q86UF4 302 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 TGIF2LXQ8IUE1 241 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 OR8H3Q8N146 312 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 TMEM86BQ8N661 226 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 OR5R1Q8NH85 324 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 SOSTQ9BQB4 213 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 TOLLIPQ9H0E2 274 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 PTTG2Q9NZH5 202 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 PIPOXQ9P0Z9 390 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 KLK11Q9UBX7 282 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 MTFP1Q9UDX5 166 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 ZNF221Q9UK13 617 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 POMT1Q9Y6A1 747 aa11.86□□□□□ -0.51
PNKP-221ENST00000627317 SAA2-SAA4A0A096LPE2 208 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 VGLL3A8MV65 326 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 ZNF736B4DX44 427 aaPredicted RBP11.85□□□□□ -0.51
PNKP-221ENST00000627317 H3BUX3 64 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 RAB29O14966 203 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 TXNL1O43396 289 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 PMP2P02689 132 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 OR8U9P0C7N5 309 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 SAA2P0DJI9 122 aaPredicted RBP11.85□□□□□ -0.51
PNKP-221ENST00000627317 OR5H8P0DN80 308 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 BRS3P32247 399 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 HRH1P35367 487 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 IER3P46695 156 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 GPR12P47775 334 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 SSBP1Q04837 148 aaKnown RBP11.85□□□□□ -0.51
PNKP-221ENST00000627317 ZNF816Q0VGE8 651 aaPredicted RBP11.85□□□□□ -0.51
PNKP-221ENST00000627317 ACTBL2Q562R1 376 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 C12orf54Q6X4T0 127 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 OR8U1Q8NH10 309 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 ABHD14BQ96IU4 210 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 S1PR3Q99500 378 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 OR2D2Q9H210 308 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 RNF150Q9ULK6 438 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 V9GYH0 126 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 PKD1L1Q8TDX9 2849 aa11.85□□□□□ -0.51
PNKP-221ENST00000627317 A0A1W2PPI3 338 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 TIMM23O14925 209 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 GSTZ1O43708 216 aaPredicted RBP11.84□□□□□ -0.51
PNKP-221ENST00000627317 LANCL1O43813 399 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 PTBP1P26599 531 aaKnown RBP eCLIP11.84□□□□□ -0.51
PNKP-221ENST00000627317 FCGR2CP31995 323 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 ETV6P41212 452 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 DYNLT3P51808 116 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 LUMP51884 338 aaPredicted RBP11.84□□□□□ -0.51
PNKP-221ENST00000627317 HERV-K104P61576 105 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 FAM71F2Q6NXP2 309 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 MOB3BQ86TA1 216 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 RTN4IP1Q8WWV3 396 aaPredicted RBP11.84□□□□□ -0.51
PNKP-221ENST00000627317 ST6GALNAC6Q969X2 333 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 GHITMQ9H3K2 345 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 VPREB3Q9UKI3 123 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 OR2W1Q9Y3N9 320 aa11.84□□□□□ -0.51
PNKP-221ENST00000627317 IGHV1-3A0A0C4DH29 117 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 J3QRK9 145 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 TUSC2O75896 110 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 TBPP20226 339 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 AADACP22760 399 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 RFX2P48378 723 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 TAS2R19P59542 299 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 DYRK1AQ13627 763 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 ZNF79Q15937 498 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 LY6EQ16553 131 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 RNASE10Q5GAN6 216 aaKnown RBP11.83□□□□□ -0.52
PNKP-221ENST00000627317 ZNF833PQ6ZTB9 187 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 LYSMD2Q8IV50 215 aa11.83□□□□□ -0.52
PNKP-221ENST00000627317 ODF3L1Q8IXM7 274 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms