RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 TMEM92Q6UXU6 159 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 MRPL52Q86TS9 123 aaKnown RBP12.94□□□□□ -0.34
PMS1-221ENST00000624204 OR1L6Q8NGR2 347 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 TECTBQ96PL2 329 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 OBP2AQ9NY56 170 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 TIMM8BQ9Y5J9 83 aaPredicted RBP12.94□□□□□ -0.34
PMS1-221ENST00000624204 ICE1Q9Y2F5 2266 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 NPIPA2E9PIF3 369 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 NPIPA3F8WFD2 350 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 PMCHP20382 165 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 SUMO3P55854 103 aaPredicted RBP12.94□□□□□ -0.34
PMS1-221ENST00000624204 SOX8P57073 446 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 OR1L3Q8NH93 324 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 ZNF488Q96MN9 340 aa12.94□□□□□ -0.34
PMS1-221ENST00000624204 ALKBH3Q96Q83 286 aaPredicted RBP12.94□□□□□ -0.34
PMS1-221ENST00000624204 DOCK10Q96BY6 2186 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 NDUFB4O95168 129 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 B4GALT1P15291 398 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 DRD1P21728 446 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 CD38P28907 300 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 OTX2P32243 289 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 HIST3H3Q16695 136 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 FFAR4Q5NUL3 377 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 RAET1LQ5VY80 246 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 Q6ZN92 141 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 HS3ST6Q96QI5 342 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 CTXND1A0A1B0GTU2 59 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 CEACAM8P31997 349 aaPredicted RBP12.93□□□□□ -0.34
PMS1-221ENST00000624204 HINT1P49773 126 aaPredicted RBP12.93□□□□□ -0.34
PMS1-221ENST00000624204 OR1D5P58170 312 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 UBE2NP61088 152 aaKnown RBP12.93□□□□□ -0.34
PMS1-221ENST00000624204 LINC01551Q86U37 167 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 NAPSAO96009 420 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 CADM4Q8NFZ8 388 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 PCED1AQ9H1Q7 454 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 WIPI2Q9Y4P8 454 aa12.93□□□□□ -0.34
PMS1-221ENST00000624204 THADAQ6YHU6 1953 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 F2Z2F3 143 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 TUSC2O75896 110 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 NTF3P20783 257 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 NPPCP23582 126 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 PAFAH1B2P68402 229 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 PLPPR2Q96GM1 343 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 WNT10AQ9GZT5 417 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 GPR27Q9NS67 375 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 HS3ST3A1Q9Y663 406 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 TRANK1O15050 2925 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 MDFIC2A0A1B0GVS7 189 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 AQP7P3A6NL99 342 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 YPEL1O60688 119 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 OTX1P32242 354 aaPredicted RBP12.92□□□□□ -0.34
PMS1-221ENST00000624204 HNRNPA3P51991 378 aaKnown RBP12.92□□□□□ -0.34
PMS1-221ENST00000624204 SUMO1P63165 101 aaKnown RBP12.92□□□□□ -0.34
PMS1-221ENST00000624204 SPATA45Q537H7 98 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 ASPHD1Q5U4P2 390 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 IFI44Q8TCB0 444 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 NABP1Q96AH0 204 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 YPEL2Q96QA6 119 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 ZNF552Q9H707 407 aaPredicted RBP12.92□□□□□ -0.34
PMS1-221ENST00000624204 ATG2AQ2TAZ0 1938 aa12.92□□□□□ -0.34
PMS1-221ENST00000624204 IGKV1-6A0A0C4DH72 117 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 KITLGP21583 273 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 FUT6P51993 359 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 SIGLECL1Q8N7X8 197 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 ZNF114Q8NC26 417 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 ADPRHL1Q8NDY3 354 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 USF3Q68DE3 2245 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 DIRC3C9JPN6 131 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 ZNF90Q03938 601 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 OR6C1Q96RD1 312 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 ELOVL5Q9NYP7 299 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 TP53TG3Q9ULZ0 132 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 LOC102725191A0A1B0GVB3 256 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 VENTXO95231 258 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 BCL3P20749 454 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 ATP5G3P48201 142 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 VASH2Q86V25 355 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 PSMF1Q92530 271 aa12.91□□□□□ -0.34
PMS1-221ENST00000624204 TPRP12270 2363 aaKnown RBP12.9□□□□□ -0.34
PMS1-221ENST00000624204 BADQ92934 168 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 ZNF501Q96CX3 271 aaPredicted RBP12.9□□□□□ -0.34
PMS1-221ENST00000624204 STARD4Q96DR4 205 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 KLHDC7BQ96G42 594 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 GAL3ST2Q9H3Q3 398 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 FER1L5A0AVI2 2057 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 KIR2DS1A0A191URI9 304 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 NDUFB8O95169 186 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 IGHV4-34P06331 123 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 TDGF1P13385 188 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 KIR2DS4P43632 304 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 KIR2DS1Q14954 304 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 UNQ5815/PRO19632Q6UWF5 114 aa12.9□□□□□ -0.34
PMS1-221ENST00000624204 ACSF3Q4G176 576 aaPredicted RBP12.9□□□□□ -0.35
PMS1-221ENST00000624204 GCSAMLQ5JQS6 135 aa12.9□□□□□ -0.35
PMS1-221ENST00000624204 VHLLQ6RSH7 139 aa12.9□□□□□ -0.35
PMS1-221ENST00000624204 APH1AQ96BI3 265 aa12.9□□□□□ -0.35
PMS1-221ENST00000624204 MRPL18Q9H0U6 180 aaKnown RBP12.9□□□□□ -0.35
PMS1-221ENST00000624204 F6UZH7 168 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 SLC17A3O00476 420 aa12.89□□□□□ -0.35
PMS1-221ENST00000624204 SH2D1BO14796 132 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms