RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SSUH2Q9Y2M2 353 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 IGKV1D-13A0A0B4J2D9 117 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 GALR2O43603 387 aaPredicted RBP10.98□□□□□ -0.65
MSH6-215ENST00000622629 IGKV1-13P0DP09 117 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 KLF3P57682 345 aaPredicted RBP10.98□□□□□ -0.65
MSH6-215ENST00000622629 Q5PR19 223 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 LINC00596Q86U02 117 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 SSMEM1Q8WWF3 244 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 BSCL2Q96G97 398 aaPredicted RBP10.98□□□□□ -0.65
MSH6-215ENST00000622629 ACY3Q96HD9 319 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 SNX22Q96L94 193 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 OR4C12Q96R67 309 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 C1QTNF5Q9BXJ0 243 aa10.98□□□□□ -0.65
MSH6-215ENST00000622629 CARHSP1Q9Y2V2 147 aaKnown RBP10.98□□□□□ -0.65
MSH6-215ENST00000622629 MMP9P14780 707 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 GALR1P47211 349 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 KHDC3LQ587J8 217 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 DHRS7BQ6IAN0 325 aaPredicted RBP10.97□□□□□ -0.65
MSH6-215ENST00000622629 LINC00518Q8N0U6 118 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 MIOXQ9UGB7 285 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 LRRC3CA6NJW4 275 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 FGF16O43320 207 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 PAGE4O60829 102 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 OR5G3P0C626 314 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 HIST1H2BAQ96A08 127 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 SLC35E1Q96K37 410 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 TUBG2Q9NRH3 451 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 ZNF385CQ66K41 422 aaPredicted RBP10.97□□□□□ -0.65
MSH6-215ENST00000622629 MRGPRGQ86SM5 289 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 BTF3L4Q96K17 158 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 CYTL1Q9NRR1 136 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 GLRX2Q9NS18 164 aa10.97□□□□□ -0.65
MSH6-215ENST00000622629 SSTP61278 116 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 PNRC1Q12796 327 aaPredicted RBP10.96□□□□□ -0.65
MSH6-215ENST00000622629 WBP1Q96G27 269 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 ABHD14AQ9BUJ0 271 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 TUBD1Q9UJT1 453 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 NCOA6Q14686 2063 aaPredicted RBP10.96□□□□□ -0.65
MSH6-215ENST00000622629 PCNX3Q9H6A9 2034 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 TGOLN2O43493 480 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 BCL2P10415 239 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 COX5BP10606 129 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 COL10A1Q03692 680 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 TIGITQ495A1 244 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 OR5P3Q8WZ94 311 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 NEIL1Q96FI4 390 aaPredicted RBP10.96□□□□□ -0.65
MSH6-215ENST00000622629 PRO3102Q9H379 93 aa10.96□□□□□ -0.65
MSH6-215ENST00000622629 WNT9BO14905 357 aa10.96□□□□□ -0.66
MSH6-215ENST00000622629 SPINK4O60575 86 aa10.96□□□□□ -0.66
MSH6-215ENST00000622629 TNFAIP6P98066 277 aaPredicted RBP10.96□□□□□ -0.66
MSH6-215ENST00000622629 ATP6V1FQ16864 119 aa10.96□□□□□ -0.66
MSH6-215ENST00000622629 GGNQ86UU5 652 aa10.96□□□□□ -0.66
MSH6-215ENST00000622629 SAXO1Q8IYX7 474 aa10.96□□□□□ -0.66
MSH6-215ENST00000622629 H1FOOQ8IZA3 346 aaPredicted RBP10.96□□□□□ -0.66
MSH6-215ENST00000622629 RYDENQ9NUL5 291 aaKnown RBP10.96□□□□□ -0.66
MSH6-215ENST00000622629 CBY3A6NI87 242 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 MRPL30Q8TCC3 161 aaKnown RBP10.95□□□□□ -0.66
MSH6-215ENST00000622629 LINC00470Q9BZP3 86 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 PKIBQ9C010 78 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 RPRMQ9NS64 109 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 MKRN2OSH3BPM6 223 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 GZMHP20718 246 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 ABLIM2Q6H8Q1 611 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 KLF14Q8TD94 323 aaPredicted RBP10.95□□□□□ -0.66
MSH6-215ENST00000622629 PRO1933Q9H354 126 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 ZDHHC11Q9H8X9 412 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 PCNX2A6NKB5 2137 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 C11orf94C9JXX5 98 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 NTN3O00634 580 aaPredicted RBP10.95□□□□□ -0.66
MSH6-215ENST00000622629 RBPJQ06330 500 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 HIST3H3Q16695 136 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 RNF151Q2KHN1 245 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 BHLHA15Q7RTS1 189 aaPredicted RBP10.95□□□□□ -0.66
MSH6-215ENST00000622629 CCL17Q92583 94 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 CORO2AQ92828 525 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 DAZAP1Q96EP5 407 aaKnown RBP10.95□□□□□ -0.66
MSH6-215ENST00000622629 DMRTA2Q96SC8 542 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 GINS3Q9BRX5 216 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 DOCK11Q5JSL3 2073 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 TRBV6-7A0A0A0MS04 114 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 C9orf172C9J069 976 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 ACP1P24666 158 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 UCP1P25874 307 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 CFPP27918 469 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 PRDX2P32119 198 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 MRPS11P82912 194 aaKnown RBP10.95□□□□□ -0.66
MSH6-215ENST00000622629 ERHP84090 104 aaKnown RBP10.95□□□□□ -0.66
MSH6-215ENST00000622629 DNM1P46Q6ZS02 220 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 DRAM1Q8N682 238 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 TMEM45BQ96B21 275 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 NAT8Q9UHE5 227 aa10.95□□□□□ -0.66
MSH6-215ENST00000622629 HGFACQ04756 655 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 C9orf152Q5JTZ5 239 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 FAM78BQ5VT40 261 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 POM121L2Q96KW2 1035 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 C1orf147Q96MC9 270 aaPredicted RBP10.94□□□□□ -0.66
MSH6-215ENST00000622629 IL36GQ9NZH8 169 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 WIPF3A6NGB9 483 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 DBX1A6NMT0 343 aa10.94□□□□□ -0.66
MSH6-215ENST00000622629 HRASP01112 189 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms